Pairwise Alignments

Query, 292 a.a., Small-conductance mechanosensitive channel from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 781 a.a., mechanosensitive ion channel protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)

Query: 17  VLFLFKVITFI---LLLWFSV-DLSKKLLPYISFIDNVLKAATFLLSSHII----ISLGR 68
           +LFL+ V+ FI   LLL F V  +  K L Y++F + V K A  LL + ++    I +GR
Sbjct: 428 ILFLW-VVRFINEGLLLAFDVYTVQDKKLFYLNF-ERVGKQAPLLLYALLVFGWLILMGR 485

Query: 69  LITVRFYLRKK-----GQDPFRSNFVLGINHIA---GILNVLVLVISLMFLFGIDP---- 116
                 YL K       QD    N+   IN +     I+ + VLV  ++  F  D     
Sbjct: 486 NFPAFEYLAKPLGNFFSQDRTLGNYTFSINGLVLFVAIMAISVLVSKIVSFFASDEHLAV 545

Query: 117 -----------GEFFTSITI--------VAAAIALLSKDYIT------------------ 139
                      G +   I I        +A A A +  D IT                  
Sbjct: 546 DKDSKQKKRGLGSWILLIRIFILGIGLFLAIAAAGIPMDRITIVLGALGVGIGFGLQTLV 605

Query: 140 -NMINGLIIMFSDQLSLGDTVKIGDQQGKIQDVTLLNMVLVNEEADIVMIPNATILTSQV 198
            N+++GLII F   +++GD V +  Q G ++ +   + V+   +   V++PN  +L S +
Sbjct: 606 NNLVSGLIIAFEKPVNVGDIVDVDGQGGTMKSIGFRSSVISTWDGADVVMPNGDLLNSHL 665

Query: 199 INYSRQHHKK 208
           +N+S   ++K
Sbjct: 666 VNWSLAGNRK 675