Pairwise Alignments

Query, 280 a.a., Bacteroides conjugative transposon TraN protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 365 a.a., TraN-like protein (NCBI) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (270), Expect = 2e-28
 Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 12/259 (4%)

Query: 21  VRPEAVLTPYPVEVGWDQTTVLIFPAKIKSADRGNGNVLAQKDAYAANVLKLKAGKRGFS 80
           +RP+ +   Y  EV     T LI P K+   D G+  +   K     N++++ A      
Sbjct: 114 IRPDTI---YLNEVS---QTHLIAPEKVIYIDYGDTCIQVSKAENTENIVRMIAATGKVE 167

Query: 81  E----SNLHVVTEDGKIYPFTVHYNPKPDKLTIDIGKQQQMEAAVAVLENTDIGREQLDR 136
           E    +N+ + TE GK Y F V Y  +P+    +IG+++  + A  +L +  I   + D+
Sbjct: 168 EFPRQTNVSLATEGGKFYTFNVDYRQQPEAFVYEIGEKRPEKKANVILTDNIIPAGERDQ 227

Query: 137 LSGKVFQEK-GFLYRSDKNGKVKLRLKGIYSHREVLFFLFELKNRSRIACPIQQWRFVIQ 195
           +  +V+  K G   +     K+   +  ++ +  +L F FE++N+S++   I   R+ I 
Sbjct: 228 VMSRVYNAKRGIFNKGIVRNKIVFSVNNLHIYDNLLLFTFEIENKSKLPYDIDYIRYYII 287

Query: 196 DRKQVKRTAERQVNLTPLHMQYEKPKGIEGKGENRLVVAFSQFTIADAKKMVIRLFEENG 255
           D+K  K TA ++V+   L  +   P+ IEG G  + V+AF +FTI D K   I + E+NG
Sbjct: 288 DKKTAKLTASQEVDQQALFSENYSPR-IEGNGRMKYVIAFDKFTIPDEKVFRIEINEKNG 346

Query: 256 DRNPVLSVKGKHLLKARPI 274
            R+ +  ++   ++    I
Sbjct: 347 GRHVLFDLENSDIVNVEDI 365



 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 3   KLYVSLVFSCLVGLAFGQVRPEAVLTPYPVEVGWDQTTVLIFPAKIKSADRGNGNVLAQK 62
           K   S + +  V  A  Q+RP   L   P+ V + +T  L+FP+ +K        V    
Sbjct: 2   KAICSFILALAVSSAGAQIRPVESL---PIAVNYSKTIHLVFPSAVKYNQAVTDFVAVDN 58

Query: 63  DAYAANVLKLKAGKRGFS-ESNLHVVTEDGKIYPFTVHY 100
                N+L++KA ++ FS ++ + V TE G  Y F V Y
Sbjct: 59  PESVPNILRIKANRKSFSKQTTVSVATEGGFFYSFNVTY 97