Pairwise Alignments

Query, 184 a.a., peptide deformylase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  104 bits (259), Expect = 9e-28
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 9/167 (5%)

Query: 5   IIAYGNPILKREAAEINE-GEDINELISDMFDTMDNANGVGLAAPQINKGIRLFVIDSSL 63
           ++ + +  L+ +A  I E   ++   I DMF+TM    G+GLAA Q++   +L V+D   
Sbjct: 6   VLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIVMD--- 62

Query: 64  MLDEDSEEKGFRKVFINPIILDEYGDDYGFEEGCLSIPDVRAEITRPETLTIEYFDENWN 123
            L ++ E     KVFINP I+   GD +  EEGCLS+P + A++ R E +T++  D + N
Sbjct: 63  -LQDEVERP---KVFINPEIIASSGD-FCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117

Query: 124 LKEEEFSGMTARVIQHEYDHLEGILFVDYIKGLKKRLVKSKLIDVSK 170
               E   + A  IQHE DHL+G LFVDY+  LK++ +K KL   +K
Sbjct: 118 EFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAK 164