Pairwise Alignments

Query, 1036 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1056 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 1175 bits (3040), Expect = 0.0
 Identities = 595/1058 (56%), Positives = 759/1058 (71%), Gaps = 24/1058 (2%)

Query: 1    MERRIT-IFFISCLLLLPMLSYAQNNEITGNVTLKSNGEPLPGVAVMIEGSGTGTITDVD 59
            M  R T +FFI C++  P+   AQ+  +TG VT + NG PLPGV V ++G+     TD +
Sbjct: 1    MRGRFTFVFFIYCIMAFPLALLAQDIPVTGKVT-EQNGSPLPGVTVKLDGTTRAASTDAN 59

Query: 60   GKYSIQAPSGSTLVFSLLGMKPQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVV 119
            G +SIQAP G  L  SL+GM PQ VTI     +NV L  +   L EVVVVGYG QKKSVV
Sbjct: 60   GVFSIQAPVGGKLTISLIGMAPQTVTIPAGGRINVSLTADSKDLTEVVVVGYGTQKKSVV 119

Query: 120  TGAISSVKASDLESMPINRVEQALQGRTSGLTIASSSGQPGSGATVRVRGLTTFGN--ND 177
            TGAISSVKASDLE+ P+ R+EQ+LQGRTSGLTIA++SGQPGS +TVR+RG T+FGN  ND
Sbjct: 120  TGAISSVKASDLENQPVVRIEQSLQGRTSGLTIAATSGQPGSSSTVRLRGFTSFGNSKND 179

Query: 178  PLWVVDGVVVDNGGIGYLNQSDIESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIR 237
            PLWV+DGVV+D GGIGYLNQ DIESIEVLKD AS AIYG RAAAGVILVTTKKG+AG + 
Sbjct: 180  PLWVIDGVVIDAGGIGYLNQDDIESIEVLKDGASAAIYGTRAAAGVILVTTKKGKAGTLN 239

Query: 238  VNYNGYYGTSAPAKKLDLLDASQYAMIRNEAATNAGNTAPFSNPASYGAGTDWQDLIFNN 297
            +NY+GYYGT APAK+LDLLDA+QYA +RN+A  +AG    F+NPA+ GAGTDWQDLIFNN
Sbjct: 240  INYSGYYGTQAPAKRLDLLDATQYATLRNQALVSAGKAPAFANPAALGAGTDWQDLIFNN 299

Query: 298  SAQRQNHELSISGGNEKSTFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQLASWLKVG 357
            SA +Q+HE S+SGG+EK+T++TSFGY D +GIVA+ ISK+ R N R+N+  +    +  G
Sbjct: 300  SAPKQSHEFSVSGGSEKATYFTSFGYTDIKGIVATPISKFNRANVRINTSFKPIKGVTFG 359

Query: 358  QNLGYAHDKSIGLGNTNSEFGGPLSSAINLDPMTPAIISDP--NIAGQPPYSTNPV---- 411
            +NLGY+H  + G+G TN EFGG LSSAINLDP+TP+II+DP    A  P  + NPV    
Sbjct: 360  ENLGYSHGVNSGIGETNREFGGVLSSAINLDPITPSIITDPASQSAFFPSATGNPVQNAA 419

Query: 412  -IRDAMGRPYGISTIVAQEMTNPLAYTQTRLGNYSWSDNFVGNVYAEAEPIKGLKLRSTL 470
              R+  G+ +GIS  V QEM NPLA  Q RLGNY +  N VGNV+A+ EPIKGL +RS+L
Sbjct: 420  ATRNGDGQLFGISPYVLQEMKNPLAMIQNRLGNYGYDHNIVGNVFADLEPIKGLHIRSSL 479

Query: 471  GAKLSYWGSESFTPIFYLNATTVSNQTNFTRNQNRRFDWNLENTISYSKAIDQHNFTVLL 530
            G K++++GS SFTPI Y N +T  NQ++ +R      +WNLENTISY+K ID+HNFT LL
Sbjct: 480  GTKMAFYGSNSFTPIAYYNTSTPINQSSLSRENTYVINWNLENTISYNKVIDKHNFTFLL 539

Query: 531  GQGAYLDNRGRSATVTFFNVPANNFEDASLNFK-VPNDQRNADGSEGAGHTVSSLFARAN 589
            G G Y D   R ATV + NVPA  F++AS  +  +P D+ N+ G +G  H ++SLF+R  
Sbjct: 540  GHGEYKDGNQRRATVVYNNVPAKTFDEASFRYNALPADRTNSSGGDGTDHRINSLFSRIQ 599

Query: 590  YNYTEKYLLEALVRRDGSSRFGPNNRYGIFPSFSAGWVITQEAFWPTNPVVDFLKVRGGY 649
            YNY EKYL  AL+RRDGSSRFG NN++G FPS S GWV T E F+P N V+ FLK+RG Y
Sbjct: 600  YNYGEKYLFSALIRRDGSSRFGGNNKFGYFPSGSIGWVPTLENFFPKNDVLTFLKIRGSY 659

Query: 650  GIVGNDNIGDFAFLSTIGSG--RNYTIGNTGSYV-IGYSPNAPSNPDLKWEETSQANIGF 706
            GI GND IGDF ++  +G+G  RNY  G+T   V +GYSP AP+NPDLKWEET QA+IG 
Sbjct: 660  GITGNDGIGDFPYIPIVGAGGDRNYVFGSTNETVYVGYSPGAPANPDLKWEETRQADIGI 719

Query: 707  EATLFGDFNITFDWYKKVTKGILQNPRIPGYVGAISNPAANVADMENRGVELELGYRKML 766
            +ATLF +  +T D Y K T GILQNP IPGY G   + A NVAD++NRG+E+ELGYR  +
Sbjct: 720  DATLFKNLTLTVDIYDKKTTGILQNPPIPGYAG-YGSFAQNVADIQNRGLEIELGYRNKI 778

Query: 767  GELELSLNGNISYLENEVTNLGTDISYLSGGQSFQASSYPITRTAVGQSMNSFYGFQTQG 826
            G+L+  +NGNIS+ +N+VT L     +L    +   +   ITRT +      +YG+Q+ G
Sbjct: 779  GQLDFGVNGNISFYKNKVTQLLPGNLFLEDNSATFQNFGNITRTGLNLPYQQYYGYQSLG 838

Query: 827  IFQTIEDVENYTNTDG-EMIQPNAQPGDFIWADLNKDGQITEADRTFIGNPTPTWSYGFT 885
            IFQ+  +V++Y   DG   +QPNA+PGD  +A+L  D  I   DRT++GNP PT SYG T
Sbjct: 839  IFQSQAEVDSYFGADGVTKLQPNAKPGDLKFANLTNDNIINPDDRTYLGNPNPTVSYGIT 898

Query: 886  ANFQWNNFDLVFFGQGVAGNKIFQGLRRLDISNANWQTEVLNRWTGPGTSNDYPRIVEGD 945
             N  + NFD   FG G  GN+IFQGLRRLDI+ AN+Q++ L+ WT   T    PRIV+GD
Sbjct: 899  INLGYKNFDFTAFGSGSGGNQIFQGLRRLDIATANYQSKYLDAWTPSNTGASLPRIVDGD 958

Query: 946  PNKNFNNPSDFYLEDGDYFRIKTLQLGYTLPKNLISKVAMNRARVYVMSENLATFTKYSG 1005
            PN N++  ++ YLE G++FR++T+QLGY+LPKN+ISK  M + RVYV++ENL T TKY+G
Sbjct: 959  PNGNYSKFTNLYLESGNFFRLRTMQLGYSLPKNIISKWGMKKLRVYVLAENLFTITKYTG 1018

Query: 1006 YDPEI-------GGGVMSIDRGIYPQARSYMLGVQIGF 1036
            YDPE+       GG    IDRG YPQAR+++ G+ +GF
Sbjct: 1019 YDPELGVTADSGGGAQYGIDRGAYPQARAFLFGLNVGF 1056