Pairwise Alignments

Query, 1036 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1001 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  563 bits (1450), Expect = e-164
 Identities = 362/1042 (34%), Positives = 543/1042 (52%), Gaps = 56/1042 (5%)

Query: 4    RITIFFISCLLLLPMLSYAQNNEITGNVTLKSNGEPLPGVAVMIEGSGTGTITDVDGKYS 63
            RI++    CLL + + + AQN  + G V    +  PLPGV ++++G+  GT TDV+G YS
Sbjct: 7    RISVLAAFCLLTINV-ALAQNITVKGKVIDGGDKTPLPGVTILVKGTQNGTQTDVNGNYS 65

Query: 64   IQAPSGSTLVFSLLGMKPQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVVTGAI 123
            I  P  +TLVF+ +G    +  ++NQT LNV L  +   LE+VVVVGYG Q+K  VTGA+
Sbjct: 66   ISVPGDATLVFNFVGYTALEQAVNNQTTLNVSLASSTQQLEQVVVVGYGTQRKIDVTGAV 125

Query: 124  SSVKASDLESMPINRVEQALQGRTSGLTIASSSGQPGSGATVRVRGL-TTFGNNDPLWVV 182
            +SVK  D+          ALQG+ +G++I +++G PG   T+ +RG  T +G + PL+VV
Sbjct: 126  ASVKGEDISKQASVNPVGALQGKVAGVSI-TNTGTPGGSPTITIRGTGTIYGKSVPLYVV 184

Query: 183  DGVVVDNGGIGYLNQSDIESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIRVNYNG 242
            DGV  D+  I +LN +DI +I +LKDA++Q+IYG RAA GV+LVTT KG+ G   +NYNG
Sbjct: 185  DGVWYDD--INFLNPADIANISILKDASAQSIYGIRAANGVVLVTTNKGKKGDAVINYNG 242

Query: 243  YYGTSAPAKKLDLLDASQYAMIRNEAATNAGNTAPFSNPASYGAGTDWQDLIFNNSAQRQ 302
              G      ++++ +AS+YA   NEA    G    F+N  + G GT+W D++    A   
Sbjct: 243  TVGFQKVTNQVEMANASEYAAAVNEAYALQGAQPLFAN-TNLGEGTNWYDVVLRE-ALVT 300

Query: 303  NHELSISGGNEKSTFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQLASWLKVGQNLGY 362
            NH+LSISGG+EKST+  S GYL+Q+GIV +  + YKR   RL+++ Q+   LK+G N+  
Sbjct: 301  NHQLSISGGSEKSTYNLSLGYLNQDGIVKN--NNYKRYTARLSNDFQIFQPLKIGYNVTA 358

Query: 363  AHDKSIGLGNTNSEFGGPLSSAINLDPMTPAIISDPNIAGQPPYSTNPVIRDAMGRPYGI 422
               KS    +T         +     P+ P   +D                 + G P   
Sbjct: 359  TSSKSKDAPSTI------FRALYAASPVVPVFNAD----------------GSYGDPNAF 396

Query: 423  STIVAQEMTNPLAYTQTRLGNYSWSDNFVGNVYAEAEPIKGLKLRSTLGAKLSYWGSESF 482
            +      M NP A T       +      GNVYAE + +K    +++ G          +
Sbjct: 397  NLGNGSNM-NPQA-TLDFFNQQTTKYKVTGNVYAELKFLKDFTFKTSFGGDFGQEEVRGY 454

Query: 483  TPIFYLNATTVSNQTNFTRNQNRRFDWNLENTISYSKAIDQHNFTVLLGQGAYLDNRGRS 542
             P++  + T  +  +    ++    +W +ENT++Y K    H+ TVL+GQ A   N+  +
Sbjct: 455  IPVYKASNTQQNTNSRLDIDRIENRNWIIENTLTYDKKWTDHSLTVLVGQTAQR-NKMYT 513

Query: 543  ATVTFFNVPANNFEDASLNFKVPNDQRNADGSEGAGHTVSSLFARANYNYTEKYLLEALV 602
                  NVP  +  D  L       +   D  E +  T +S FAR NY+Y  +YLL A +
Sbjct: 514  INADALNVPYTSEGDLYLALGNAASRNITDSGELS--TFASYFARVNYSYKNRYLLNASI 571

Query: 603  RRDGSSRF-GPNNRYGIFPSFSAGWVITQEAFWPTNPVVDFLKVRGGYGIVGNDNIGDFA 661
            RRDG+S+F G +N +G FPS  AGWVI+ E F     +   LK+RG +G VGN  +    
Sbjct: 572  RRDGASQFFGSDNLWGNFPSIGAGWVISNEEFMKDQKIFSNLKLRGSWGKVGNAGVPFNP 631

Query: 662  FLSTIGSGRNYTIGNTGSYVIGYSPNAPSNPDLKWEETSQANIGFEATLFGD-FNITFDW 720
               T+           G    G S  +   P L WE ++  ++G E     +   +  D+
Sbjct: 632  STQTVDQSAGLVAIFGGLPYTGASIRSIVPPFLLWERSAGTDVGLEMGFLNNRLTVEADY 691

Query: 721  YKKVTKGILQNPRIPGYVG-AISNPAANVADMENRGVELELGYR-KMLGELELSLNGNIS 778
            Y + T+  + +  + G +G A S   AN AD++NRG E    +  K  G    S++GN+ 
Sbjct: 692  YSRKTEQAIFDIPVFGNLGTANSTLIANQADIQNRGFEFSATWADKTEGGFSYSVSGNVG 751

Query: 779  YLENEVTNLGTDISYLSGGQSFQASSYPITRTAVGQSMNSFYGFQTQGIFQTIEDVENYT 838
               N+V N+ +  + +  G +   S Y  TRT   + +  F+G+Q +G+FQT  +   + 
Sbjct: 752  INNNKVLNVTSGSNPIYRGGAGITSGYLSTRTVNNRPIGEFFGYQVEGVFQTDAEAAAW- 810

Query: 839  NTDGEMIQPNAQPGDFIWADLNKDGQITEADRTFIGNPTPTWSYGFTANFQWNNFDLVFF 898
                    P  + GDF +AD+N DG I   DR  +GNP P ++YG   NF + NFDL   
Sbjct: 811  --------PGFKRGDFKYADINGDGIIDLRDRVVLGNPNPKFTYGVNTNFAYKNFDLTLD 862

Query: 899  GQGVAGNKIFQGLRRLDISNANWQTEVL-NRWTGPGTSNDYPRIVEGDPNKNFNN-PSDF 956
             QGVA   +F         N N+  + + NRWT  GTSN Y            NN P+ F
Sbjct: 863  IQGVADVDVFNANLSNRFGNENYTKDFISNRWTSAGTSNTY---ASASLASGLNNAPNSF 919

Query: 957  YLEDGDYFRIKTLQLGYTLPKNLISKVAMNRARVYVMSENLATFTKYSGYDPEIGGGVMS 1016
            Y+E GDY R++ +QLGYTLP+ + +K+ M R R++V ++N      Y G+ PE+GG   +
Sbjct: 920  YVEKGDYIRLRNIQLGYTLPQVISNKMKMQRLRLFVNAQNAVNIFGYKGFSPEVGGAPTN 979

Query: 1017 --IDRGIYPQARSYMLGVQIGF 1036
              ID  +YP   +Y  GV + F
Sbjct: 980  AGIDTNVYPLFATYNFGVNVTF 1001