Pairwise Alignments

Query, 1036 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1028 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  509 bits (1310), Expect = e-148
 Identities = 355/1058 (33%), Positives = 536/1058 (50%), Gaps = 80/1058 (7%)

Query: 21   YAQNNEITGNVTLKSNGEPLPGVAVMIEGSGTGTITDVDGKYSIQAPSGSTLVFSLLGMK 80
            +AQ+  I G VT     + +PGV + ++GS   T TD +G+Y IQA     LVF+ +G +
Sbjct: 9    FAQSRTIIGVVT-DGQKQTIPGVTIQVKGSKIITQTDEEGRYRIQALPADQLVFNYVGYQ 67

Query: 81   PQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVVTGAISSVKASDLESMPINRVE 140
             + V++  +T +N+ L+ +   L +VVV+GYG   ++ ++ +I+SVK SD E  P+   E
Sbjct: 68   AETVSVGAKTTINITLKPSSIGLSDVVVIGYGSANRNDLSTSIASVKMSDFEKAPVKSFE 127

Query: 141  QALQGRTSGLTIASSSGQPGSGATVRVRGLTTF-GNNDPLWVVDGVVVDNGGIGYLNQSD 199
            +AL GR +G+ +A S GQPG+ + + +RG  +   +N PL+V+DG  +DN     +N  D
Sbjct: 128  EALAGRVAGVQVAGSDGQPGAVSNIVIRGAGSITQDNSPLYVIDGFPMDNANNNSINPDD 187

Query: 200  IESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIRVNYNGYYGTSAPAKKLDLLDAS 259
            IESI+VLKDAA+ AIYG+R A GVI + TK+G+ GK  V YNGYYG     K++ ++D  
Sbjct: 188  IESIDVLKDAAATAIYGSRGANGVIQIVTKRGKTGKPVVAYNGYYGLQENTKRIAVMDPY 247

Query: 260  QYAMIRNE---AATNAGNTAPFSNPASYGA--GTDWQDLIFNNSAQRQNHELSISGGNEK 314
             +  + NE     T  G         SY    GTD+QD +F   A  QNH LS+ GG ++
Sbjct: 248  NFVKLANELDPVGTAQGYFIEGRTLESYQGLQGTDYQDQLF-KIAPYQNHSLSLRGGADQ 306

Query: 315  STFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQLASWLKVGQNLGYAHDKSIGLGNTN 374
            + +  S  Y DQEGI+ +  S + RI  R   +H ++  +K G N+ Y++ +S       
Sbjct: 307  TKYSLSTNYQDQEGIIIN--SGFSRIQSRFTLDHNVSKKVKAGINVNYSYTQS------- 357

Query: 375  SEFGGPLSSAINLDPMTPAIISDPNIAGQPPYSTNPVIRDAMGRPYGIS--TIVAQEMTN 432
              +GGP+ S+      + +I +  +I G  P + + +  D      G+    + +    N
Sbjct: 358  --YGGPIGSS----NFSASINTLYSIWGYRPITGSLLPIDDQLYDPGLPAVNVYSDYRAN 411

Query: 433  PLAYTQTRLGNYSWSDNFVGNVYAEAEPIKGLKLRSTLGAKL------SYWGSESFTPIF 486
            P+   + R+ N + S+N   N Y E E IKGLKL+ST G  +      +++GS +     
Sbjct: 412  PILDLKNRINN-NKSNNLDANAYVEYEIIKGLKLKSTGGISIANARVNAFYGSNT----- 465

Query: 487  YLNATTVSNQTNFTRNQNRRFDWNLENTISYSKAIDQ-HNFTVLLG---QGAYLDNRGRS 542
             L     + + N +   N    W  ENT++Y+K I+  HN   ++G   Q A   + G S
Sbjct: 466  ALGGPYTAQKVNGSIYNNTGSTWLNENTLTYAKKINNAHNLNAVIGFSNQFAKTGSAGFS 525

Query: 543  ATVTFFNVPANNFEDASLNFKVPNDQRNADGSEGAGHTVSSLFARANYNYTEKYLLEALV 602
            AT    NVP  +    +L+       R+ + + G    + S F R +Y+Y   YL  A  
Sbjct: 526  AT----NVPNESLGLDALDLSTSIVARSVNSTWG----MQSFFTRVSYDYKSTYLFTASY 577

Query: 603  RRDGSSRFGPNNRYGIFPSFSAGWVITQEAFWPTNPVVDFLKVRGGYGIVGNDNIGDFAF 662
            R DGSSRF P  ++G FP+ SA W I  E+F     ++   K+R  YG  GN+ + DFA+
Sbjct: 578  RADGSSRFAPGEKWGYFPAVSAAWKIKNESFLKDAKILSDAKIRTSYGETGNNRVSDFAY 637

Query: 663  LSTIGSGRNYTIG-NTGSYVIGYSPNAPSNPDLKWEETSQANIGFE-ATLFGDFNITFDW 720
            LS +    N +   N     +        N  LKWE + Q NIG +   L     +T D 
Sbjct: 638  LSQLAFPLNQSYSFNNNPPELSAMIGTFGNEGLKWETSRQTNIGIDLGFLKQRMLLTADI 697

Query: 721  YKKVTKGILQNPRIPGYVGAISNPAANVADMENRGVELELGYRKMLGE-LELSLNGNISY 779
            Y+K T  +L N ++P   GA SN   NV  M+N G+EL L    +  +    + N NIS+
Sbjct: 698  YRKKTSDLLLNAQLPYTTGA-SNAFKNVGAMQNDGLELTLNTVNIQNKNFRWTTNFNISF 756

Query: 780  LENEVTNLGTDISYLSGGQSFQA--SSYPITRTAVGQSMNSFYGFQTQGIFQTIEDVENY 837
             +N+V +L  +  YL+    F    S+ P   + +GQS+   YG    GI+Q   D +  
Sbjct: 757  NKNKVVSLAENQQYLATTVGFDTRYSNIPPYISVLGQSVGQLYGHIFDGIYQ-YSDFDKM 815

Query: 838  TN---------TDGEMIQPNAQPGDFIWADLNKDGQITEADRTFIGNPTPTWSYGFTANF 888
             N               + N +PGD  + D+N DG + E DRT IG   P    GF+ NF
Sbjct: 816  PNGAYALKSNIPTNSNARANIKPGDIKFKDINGDGVVNEQDRTIIGRGLPLHVGGFSNNF 875

Query: 889  QWNNFDLVFFGQGVAGNKIFQGLRRL---DISN---ANWQTEVLNRWTGPGTSNDYPRIV 942
             + NFDL  F Q   GN +    R +     SN    N     ++RW+    SN Y R  
Sbjct: 876  TYKNFDLNVFFQWSYGNNLINANRLMFEGSTSNNPFLNQFATYIDRWSPTNPSNTYYRAG 935

Query: 943  EGDPNKNFNNPSDFYLEDGDYFRIKTLQLGYTLPKNLISKVAMNRARVYVMSENLATFTK 1002
             G      N  S   +EDG Y R+KT+ LGY   K L+ K+ ++  RVY  ++NL T T 
Sbjct: 936  GG-----INTYSSNVVEDGSYLRLKTVSLGYNFSKKLLDKIKLSSLRVYASAQNLFTMTN 990

Query: 1003 YSGYDPEIG--GGVMS--IDRGIYPQARSYMLGVQIGF 1036
            YSG DPE+     V++   D   YP+ R+ + G+   F
Sbjct: 991  YSGPDPEVSTRNSVLTPGFDFSAYPRPRTIVFGLNTSF 1028