Pairwise Alignments

Query, 1036 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1021 a.a., TonB-dependent receptor for laminaribiose (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  505 bits (1301), Expect = e-147
 Identities = 334/1053 (31%), Positives = 539/1053 (51%), Gaps = 77/1053 (7%)

Query: 6    TIFFISCLLLLPMLSYAQNNEITGNVTLKSNGEPLPGVAVMIEGSGTGTITDVDGKYSIQ 65
            +I  ++CLLL  + ++AQ   +TG VT  +N EPL G +V+++G+ TGTITD+DGKYSI 
Sbjct: 24   SIVALTCLLLTSVSAFAQTKTVTGTVTDAAN-EPLIGASVLVQGTSTGTITDMDGKYSIS 82

Query: 66   APSGSTLVFSLLGMKPQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVVTGAISS 125
                  LVFS +GM  Q V +  Q  +NV L+E+   L E VV+GYG  KK  +TG+I++
Sbjct: 83   VTPEDVLVFSYVGMTTQSVKVGAQNVINVTLKEDSQVLAETVVIGYGSAKKRDLTGSITN 142

Query: 126  VKASDLESMPINRVEQALQGRTSGLTIASSSGQPGSGATVRVRGLTTFGNNDPLWVVDGV 185
            VK  ++ + P      +LQG+ +G+ I  +SG+ G+   +R+RG  +     PL+VVDG+
Sbjct: 143  VKGEEIANKPATNPLSSLQGKVAGVQIV-NSGRAGADPEIRIRGTNSINGYKPLYVVDGL 201

Query: 186  VVDNGGIGYLNQSDIESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIRVNYNGYYG 245
              DN  I +LN  DIES+E+LKD +S AI+G R A GVI++TTKK + G+  VN N  +G
Sbjct: 202  FNDN--INFLNPEDIESMEILKDPSSLAIFGVRGANGVIIITTKKAKEGQTLVNINTSFG 259

Query: 246  TSAPAKKLDLLDASQYAMIRNEAATNAGNTAPFSNPASYGAGTDWQDLIFNNSAQRQNHE 305
                  K+DL++  Q+  + +E   N  +T PF + + + A T+WQD IF  +A   N+ 
Sbjct: 260  FKKVVDKVDLVNGPQFQELYSEQLANQKDT-PF-DFSGWNANTNWQDEIF-QTAFITNNN 316

Query: 306  LSISGGNEKSTFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQLASWLKVGQNLGYAHD 365
            +SI+G + K +FY   GY  ++G +  E  K+ ++    ++++++  +LKVG     A  
Sbjct: 317  ISITGASPKHSFYLGVGYSHEQGNIKHE--KFSKVTINASNDYKITDFLKVGFQFNGART 374

Query: 366  KSIGLGNTNSEFGGPLSSAINLDPMTPAIISDPNIAGQPPYSTNPVIRDAMGRPYGISTI 425
                L   + +  G L +A    P+ P    +  +     YS  P  + A          
Sbjct: 375  ----LPADSKQVLGALRAA----PIAPVYNKEYGL-----YSVLPEFQKA---------- 411

Query: 426  VAQEMTNPLAYTQTRLGNYSWSDNF--VGNVYAEAEPIKGLKLRSTLGAKLSYWGSESFT 483
               ++ NP+     +  N + ++N+   GN+Y E + +K    ++      +     ++ 
Sbjct: 412  ---QINNPMVDVDLK-ANTTKAENYRASGNIYGEVDFLKHFNFKAMFSMDYASNNGRTYL 467

Query: 484  PIFYLNATTVSNQ-----------TNFTRNQNR-RFDWNLENTISYSKAIDQHNFTVLLG 531
            P+  +   T +             + F  N+ + + D+ L  T S+      HN T  +G
Sbjct: 468  PVMKVYDDTAAGDVVTLGTGKTEVSQFKENETKVQSDYLLTYTNSFDHG--NHNLTATVG 525

Query: 532  QGAYLDNRGRSATVTFFNVPANNFEDASLNFKVPNDQRNA-DGSEGAGHTVSSLFARANY 590
               Y ++  R        V     +D    F    D   A +GS     T  S+ AR  Y
Sbjct: 526  FTTYYNSLSRLDGARKQGVGLVIPDDPDKWFVSIGDAATATNGSTQWERTTVSMLARVIY 585

Query: 591  NYTEKYLLEALVRRDGSSRFG-PNNRYGIFPSFSAGWVITQEAFWPTNPVVDFLKVRGGY 649
            NY  KYL     RRDGSS F    N +  F S   GW++T+E F      +D LK++  Y
Sbjct: 586  NYKGKYLFNGSFRRDGSSAFSYTGNEWQNFFSLGGGWLMTEEEFMKDIKWLDMLKIKASY 645

Query: 650  GIVGNDNIGDFAFLS--TIGSGRNYTIGNTGSYVIGYSPNAPSNPDLKWEETSQANIGFE 707
            G +GN N+ D A+ +   + +  +   G       GY  +   NP+L+WE+      GFE
Sbjct: 646  GTLGNQNL-DRAYPAEPLLSNAYSAVFGKPSIIYPGYQLSYLPNPNLRWEKVEAWEAGFE 704

Query: 708  ATLFGDFNITFD--WYKKVTKGILQNPRIPGYVGAISNPAANVADMENRGVELELGYRKM 765
              +  +  + F+  +YKK TK +L    +PG  G +     N+ ++EN GVE+   +R  
Sbjct: 705  TNVLRN-RLHFEGVYYKKRTKDLL--AEVPGISGTVPG-IGNLGEIENMGVEMAASWRDQ 760

Query: 766  LGELELSLNGNISYLENEVTNLGTDISYLSGGQSFQASSYPITRTAVGQSMNSFYGFQTQ 825
            +G+   S++ N++ ++N+V +L  D      G S  A     + T  G  +  FYG++  
Sbjct: 761  IGDWGYSVSANLTTIKNKVKSLVQD------GYSIIAGDKQQSYTMAGYPIGFFYGYKVA 814

Query: 826  GIFQTIEDVENYTNTDGEMIQPNAQPGDFIWADLNKDGQITEADRTFIGNPTPTWSYGFT 885
            G++Q+  D++       E       PGD  +AD+N+DG+IT  DRT IGNPTP ++YG +
Sbjct: 815  GVYQSQADID----ASPENTLATVTPGDLKFADVNRDGKITPEDRTMIGNPTPDFTYGLS 870

Query: 886  ANFQWNNFDLVFFGQGVAGNKIFQGLRRLDISNANWQTEVLNRWTGPGTSNDYPRIVEGD 945
                + N+ L     G  GN+IF+     + +  N+ ++ ++RW G GTSN  P +    
Sbjct: 871  LGVNYKNWSLGIDMMGQHGNEIFRTWDNYNFAQFNYLSQRMDRWHGEGTSNSQPLLNSKH 930

Query: 946  PNKNFNNPSDFYLEDGDYFRIKTLQLGYTLPKNLISKVAMNRARVYVMSENLATFTKYSG 1005
               N N  S++Y+EDG +FRI+ +QL Y+  K L++K+ +   +VYV  +NL T+   +G
Sbjct: 931  SINNLN--SEYYIEDGSFFRIRNVQLAYSFDKALLAKIRLQALKVYVNIQNLKTWKHNTG 988

Query: 1006 YDPEIGGG--VMSIDRGIYPQARSYMLGVQIGF 1036
            Y PE+GG      +D G YP    Y  G+ + F
Sbjct: 989  YTPELGGSATTFGVDDGSYPVPAVYTFGINLTF 1021