Pairwise Alignments

Query, 1036 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1041 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  475 bits (1222), Expect = e-138
 Identities = 340/1081 (31%), Positives = 530/1081 (49%), Gaps = 129/1081 (11%)

Query: 21   YAQNNEITGNVTLKSNGEPLPGVAVMIEGSGT-GTITDVDGKYSIQAPSGSTLVFSLLGM 79
            + QN  + GNVT K++G+P+ G +V+   + T GTITD DG +++  P  STL  + +G 
Sbjct: 25   WGQNITVKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGY 84

Query: 80   KPQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVVTGAISSVKASDLESMPINRV 139
            KP  VT+     +NV LEE+   ++EVVV GY  Q+K+ +TGA+S VK  +++    N  
Sbjct: 85   KP--VTVKAAAIVNVLLEEDTQMVDEVVVTGYTTQRKADLTGAVSVVKVDEIQKQGENNP 142

Query: 140  EQALQGRTSGLTIASSSGQPGSGATVRVRGLTTFGNNDPLWVVDGVVVDNGGIGYLNQSD 199
             +ALQGR  G+ I ++ G P   ATVR+RG+ T  NNDPL+++DGV     G+  LN +D
Sbjct: 143  VKALQGRVPGMNI-TADGNPSGSATVRIRGIGTLNNNDPLYIIDGVPT-KAGMHELNGND 200

Query: 200  IESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIRVNYNGYYGTSAPAKKLDLLDAS 259
            IESI+VLKDAAS +IYG+RAA GVI++TTK+G+ G+I++N++     S    K+++L+  
Sbjct: 201  IESIQVLKDAASASIYGSRAANGVIIITTKQGKKGQIKINFDASVSASMYQSKMNVLNTE 260

Query: 260  QYAMIRNEAATNAG-----NTAPFS---------NPASYG---------------AGTDW 290
            QY     +A  N G     N   ++         NP  YG               A TDW
Sbjct: 261  QYGRAMWQAYVNDGENPNGNALGYAYNWGYNADGNPVLYGMTLSKYLDSKNTMPVADTDW 320

Query: 291  QDLIFNNSAQRQNHELSISGGNEKSTFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQL 350
             D I      +Q + LS+S G+EK + + S GY    G++    + + R + R+NS+++L
Sbjct: 321  FDEITRTGVIQQ-YNLSVSNGSEKGSSFFSLGYYKNLGVIKD--TDFDRFSARMNSDYKL 377

Query: 351  AS-WLKVGQNLGYAHDKSIGLGNTNSEF---GGPLSSAINLDPMTPAIISDPNIAGQPPY 406
                L +GQ+            N  SE    GG + +A+++    P   SD +  G    
Sbjct: 378  IDDILTIGQHFTL---------NRTSEVQAPGGIIETALDIPSAIPVYASDGSWGG---- 424

Query: 407  STNPVIRDAMGRPYGISTIVAQEMTNPLAYTQTRLGNYSWSDNFVGNVYAEAEPIKGLKL 466
               PV     G P         +  NP A  +    N        G+ Y    P KG  L
Sbjct: 425  ---PV----GGWP---------DRRNPRAVLEYNKDNRYTYWRMFGDAYVNLTPFKGFNL 468

Query: 467  RSTLGAKLSYWGSESFTPIFYLNATTVSNQTNFTRNQNRRFDWNLENTISYSKAIDQHNF 526
            RST G   +   +  FT  +     T + ++     Q     W      +Y   + +H  
Sbjct: 469  RSTFGLDYANKQARYFTYPYQEGTQTNNGKSAVEAKQEHWTKWMWNAIATYQLEVGKHRG 528

Query: 527  TVLLGQGAYLDNRGRSATVTFFNVPANNFEDASLNFKVPNDQRNADGSEGAG--HTVSSL 584
             V++G     ++         F+    +F   + ++  P+       + GAG  +++ S 
Sbjct: 529  DVMIGMELNREDDSH------FSGYKEDFSILTPDYMWPDAGSGTAQAYGAGEGYSLVSF 582

Query: 585  FARANYNYTEKYLLEALVRRDGSSRFGPNNRYGIFPSFSAGWVITQEAFWPTNPVVDFLK 644
            F + NY+Y ++YLL   +RRDGSSRFG N+RY  FPS S GW ITQE F      +D LK
Sbjct: 583  FGKMNYSYADRYLLSLTLRRDGSSRFGKNHRYATFPSVSLGWRITQENFMKELTWLDDLK 642

Query: 645  VRGGYGIVGNDNIGDFA----FLSTIGS-----GRNY-----TIGNTGSYVI--GYSPNA 688
            +R  +G  GN  I + A    +    G+     G++Y       G+ G  V+  G+  N 
Sbjct: 643  LRASWGQTGNQEISNLARYTIYAPNYGTTDSFGGQSYGTAYDITGSNGGGVLPSGFKRNQ 702

Query: 689  PSNPDLKWEETSQANIGFEATLF-GDFNITFDWYKKVTKGILQNPRIPGYVGAISNPAAN 747
              N ++KWE T+Q N+G + +LF      + ++Y K    IL      G +G   +   N
Sbjct: 703  IGNDNIKWETTTQTNVGIDFSLFKQSLYGSLEYYYKKATDILTEMAGVGVLGEGGSRWIN 762

Query: 748  VADMENRGVELELGYR-KMLGELELSLNGNISYLENEVTNLGTDISYLS--GGQSFQASS 804
               M+N+G E  LGYR K    L   LNGNIS   NE+  L   ++     GG       
Sbjct: 763  SGAMKNQGFEFNLGYRNKTAFGLTYDLNGNISTYRNEILELPETVAANGKFGGNG----- 817

Query: 805  YPITRTAVGQSMNSFYGFQTQGIFQTIEDVENYTNTDGEMIQPNAQPGDFIWADLNKDGQ 864
                ++ VG +  +  G+   GIF++ ++V+N+   +G      A  G   + D++ +G 
Sbjct: 818  ---VKSVVGHTYGAQVGYIADGIFKSQDEVDNHATQEG------AAVGRIRYRDIDHNGV 868

Query: 865  ITEADRTFIGNPTPTWSYGFTANFQWNNFDLVFFGQGVAGNKIFQGLRR-------LDIS 917
            I E D+ +I +PTP++SYG     ++ NFDL  F QGV G  I   +++        ++ 
Sbjct: 869  IDERDQNWIYDPTPSFSYGLNIYLEYKNFDLTMFWQGVQGVDIISDVKKKSDFWSASNVG 928

Query: 918  NANWQTEVLNRWTGPGTSNDYPRIVEGDPNKNFNNPSDFYLEDGDYFRIKTLQLGYTLPK 977
              N  T +LN W+    ++D P +   D N N    S +++E+G + +++ +QLGYT+P 
Sbjct: 929  FLNKGTRLLNAWSPTNPNSDIPALTRSDTN-NEQRVSTYFVENGSFLKLRNIQLGYTVPA 987

Query: 978  NLISKVAMNRARVYVMSENLATF--TKYSGYDPEIGGGVMSIDRGIYPQARSYMLGVQIG 1035
             +  K+ M+R R Y  ++NL T     ++G DPE            YP   +   G+ IG
Sbjct: 988  VISKKMRMDRLRFYCSAQNLLTIKSKNFTGEDPE-------NPNFSYPIPVNITFGLNIG 1040

Query: 1036 F 1036
            F
Sbjct: 1041 F 1041