Pairwise Alignments

Query, 1036 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1146 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  509 bits (1311), Expect = e-148
 Identities = 355/1064 (33%), Positives = 536/1064 (50%), Gaps = 91/1064 (8%)

Query: 22   AQNNEITGNVTLKSNGEPLPGVAVMIEGSGTGTITDVDGKYSIQ-APSGSTLVFSLLGMK 80
            AQ       V +   GEP+ G +V I+G G+GTITD+DG+YS+   P  +TL  S +G K
Sbjct: 121  AQRTRTVQGVVVDDKGEPVIGASVQIKGEGSGTITDMDGRYSLMNVPESATLTISYIGYK 180

Query: 81   PQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVVTGAISSVKASDLESMPINRVE 140
               ++  ++    + L E+   ++EVVVVGYGVQ+K  V+ +ISSVKA  +  +  +   
Sbjct: 181  TVSLSAKDKNTAKITLTEDSKMIDEVVVVGYGVQRKRDVSTSISSVKAEQIAEVSASDFR 240

Query: 141  QALQGRTSGLTIASSSGQPGSGATVRVRGLTTFG-NNDPLWVVDGVVVDNGGIGYLNQSD 199
            QAL G+  G+ +   SG P    ++RVRG++T    +DPL+++DGV V+ G    LN +D
Sbjct: 241  QALAGKMPGVQVTQPSGDPEGSVSIRVRGISTVNAGSDPLYIIDGVPVERG-FANLNNND 299

Query: 200  IESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIRVNYNGYYGTSAPAKKLDLLDAS 259
            +ES+EVLKDA+S AIYG+R + GVI++TTK+G++ K++V Y+GYYG  + +KKL +L+A 
Sbjct: 300  VESVEVLKDASSAAIYGSRGSNGVIIITTKQGQSEKMKVQYDGYYGIQSISKKLPMLNAY 359

Query: 260  QYAMIRNEAATNAGNTA-------------------------PFSNPASYGAGTDWQDLI 294
            Q+A    +   N+   A                         P+ N       TDWQD I
Sbjct: 360  QFAEFAKDGHDNSYLDANPGGSPNDPNGMRPNSWERIPTELFPYLNGDQGLTDTDWQDAI 419

Query: 295  FNNSAQRQNHELSISGGNEKSTFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQLASWL 354
            F  SA   +H +SISG  +   ++ S  Y D+EGI+ +  S +K+ + R+N + +    L
Sbjct: 420  F-RSAATTSHNVSISGRGKTVGYFISANYYDKEGIIIN--SDFKKYSMRMNLDGKYKR-L 475

Query: 355  KVGQNLGYAHDKSIGLGNTNSEFGGPLSSAINLDPMTPAIISDPNIAGQPPYSTNPVIRD 414
            K G N   ++  S  +  + S   G + SA+ + P+ P   SD    G   Y  N   R 
Sbjct: 476  KFGLNFSPSYSTSNRVDASGS--NGIVQSALMMPPVWPVYNSD----GSYNYQGNGYWR- 528

Query: 415  AMGRPYGISTIVAQEMTNPLAYTQTRLGNYSWSDNFVGNVYAEAEPIKGLKLRSTLGAKL 474
             +G  Y  + ++     NP+A    +  +       VG V+AE E  KGL    + G   
Sbjct: 529  -IGNDYQHNAVL-----NPVAMANLQ-SDVVDRMAIVGKVFAELELFKGLTYNISFGG-- 579

Query: 475  SYWGS------ESFTPIFYLNATTVSNQTNFTRNQNRRFDWNLENTISYSKAIDQ-HNFT 527
             Y+GS       S  P+       + +      +    F+W +EN I+Y+  I++ H+  
Sbjct: 580  DYYGSHNDQYRSSELPLLGQKYYDIKSNPTAYSSSGFYFNWLIENKINYNTVINEDHSIN 639

Query: 528  VLLGQGAYLDN-RGRSATVTFFNVPANNFEDASLNFKVPNDQRNADGSEGAGHTVSSLFA 586
             +L Q A  +  +G + T T F  P +  +  S    +         S+    +++S  A
Sbjct: 640  AVLVQSAQKETYKGDNVTATDF--PNDYIQTISGGTVIKG------ASDKTQWSIASYLA 691

Query: 587  RANYNYTEKYLLEALVRRDGSSRFGPNNRYGIFPSFSAGWVITQEAFWPTN---PVVDFL 643
            R  Y+Y  KY+    +R DGSSRFG NNR+G FPS S  W ++ E F+        VD L
Sbjct: 692  RVQYSYKGKYMASGAIRADGSSRFGKNNRWGYFPSASLAWRVSGEDFFTKAKFLSFVDDL 751

Query: 644  KVRGGYGIVGNDNIGDFAFLSTIGSGRNYTIG-NTGSYVIGYSPNAPSNPDLKWEETSQA 702
            K+R  YG+ GN  IG++  LS +    NY +G   G  V GY PN   N DL WE+ +  
Sbjct: 752  KIRTSYGVTGNFQIGNYDHLSLMALD-NYILGTGNGQLVQGYKPNTIKNDDLSWEKNAMV 810

Query: 703  NIGFEATLF-GDFNITFDWYKKVTKGILQNPRIPGYVGAISNPAANVADMENRGVELELG 761
            N+G +  +F G   IT D+Y   T  +L N  +P   G  S    N+  + NRG E+ L 
Sbjct: 811  NVGVDLQMFKGLLGITVDYYNTNTSNMLLNVPVPHLTG-YSTALMNIGKVNNRGWEIALT 869

Query: 762  YRK-MLGELELSLNGNISYLENEVTNLGTDISYLSGGQSFQASSYPITRTAVGQSMNSFY 820
             +K    +   S N N +   NEV  LG   + +    S   + Y    T VG+ +  +Y
Sbjct: 870  SQKNFTKDFGYSFNANYATNTNEVKALGPGNAPIISTGSVDHAYY---ITKVGEPIGCYY 926

Query: 821  GFQTQGIFQTIEDVENYTNTDGEMIQPNAQPGDFIWADLNKDGQI-TEADRTFIGNPTPT 879
                 GIF   E+++ Y +        N QPGDF + D++ DG +  + DRT +GN  P 
Sbjct: 927  LLVQDGIFSNEEELKKYPHFS------NTQPGDFRFVDVDGDGVMDLDKDRTIVGNYMPD 980

Query: 880  WSYGFTANFQWNNFDLVFFGQGVAGNKIFQGLRR-LD--ISNANWQTEVLNRWTGPGTSN 936
            ++YGF     +   DL F  QGV GN+I    RR +D    N N  T  LNRW       
Sbjct: 981  FTYGFGGKVWYKGIDLDFNFQGVYGNEILNLNRRYIDNLEGNTNGTTIALNRWKSADNPG 1040

Query: 937  DYPRIVEGDPNKNFN-NPSDFYLEDGDYFRIKTLQLGYTLPKNLISKVAMNRARVYVMSE 995
            +         +K +N   S ++LEDG Y R++ + LGYTLP+NL  +  + + RVYV  +
Sbjct: 1041 NGQVNRANRKSKGYNGRTSTWHLEDGSYLRLQNVTLGYTLPQNLTRRFFVEKLRVYVSGQ 1100

Query: 996  NLATFTKYSGYDPEIGGGVMSI-----DRGIYPQARSYMLGVQI 1034
            NL T T Y GY+PE+     +      D G YP A++++ G+ I
Sbjct: 1101 NLWTSTNYGGYNPEVNARPSNSLSPGEDYGTYPLAKTFLFGLNI 1144