Pairwise Alignments

Query, 357 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (266), Expect = 7e-28
 Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 19/366 (5%)

Query: 1   MKSNSLFLLLVFPFLFSCE---NSTEQQEEIPLESMRNEVSATKVTVAKAEQRSFDYLIN 57
           MK  + F+LL+   LF      N  +QQ+     + R E     VTV  A    +  +I 
Sbjct: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFP-VTVVTANPVDWVPVIE 59

Query: 58  ASGKVEAGQEVMVVIERQGYLKELSVQEGQYVEAGAVIARLDNTDNVFRKEKALVQLKNA 117
           A G +E  Q V +  E  G + +++ + G  V     +  LD+       +    +L  A
Sbjct: 60  AIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAA 119

Query: 118 QASYNSEKLGFGSILEGEDQEQVLQLDEQLKASSGLLSAEIELKEAELELAKATIKAPVS 177
           +A Y   K   G   +G   ++     ++ +AS   LSA+IE  +A +  A+  IKAP +
Sbjct: 120 KAKYERYK---GLFAKGSISKESY---DEAEASYYALSADIESLKATI--ARREIKAPFA 171

Query: 178 GKVADLQVKPGSLVNAGDELCEVLNTHTLLLNVKVLESDIPFISLGQTAEVYPVSAGTGT 237
           G +    V  G  +  G ++  + +T  + L   V + DI  ISL Q  +++  +    +
Sbjct: 172 GVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTS 231

Query: 238 LSGKVGSINPKVD-ENGLVEVGIKLTGAQ-KLLPGMNARAVIRAPQSDN-VVVPKQALVY 294
             G + +I P V  ++GL++V   +  +  KL  GM ARA I  P+ +N V +P+ A+ Y
Sbjct: 232 FKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITY 291

Query: 295 RSGRPVVFTV---NG-KEAKWNYVEVGKDNGREIEILDGIKDGETVITSNNLQLGHQAQI 350
                 V+ V   NG K  + + V+VG+ +     IL+G+K G+ V+T+  ++L + A++
Sbjct: 292 TLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKV 351

Query: 351 QIAKEN 356
           +I + +
Sbjct: 352 RIVESD 357