Pairwise Alignments

Query, 437 a.a., hypothetical protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 524 a.a., putative rhamnogalacturonan acetylesterase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 42/246 (17%)

Query: 185 PTVFLAGNSTVVDQANEP---WAAWGQMFPVFFKPGKVVIANHAESGETLKAFKGARRLE 241
           P +F  G+STV ++ N+    W  WG +    F   K+ + N A +G + + F    R +
Sbjct: 295 PVLFTIGDSTVKNKDNDKNGMWG-WGSVIADEFDLNKISVENCAMAGRSARTFLDEGRWD 353

Query: 242 NVLSMMKPGDYLFIEFAHND-----------QKPGGSH------VEPFTTYQEM------ 278
            V   ++PGD++ I+F HND           + PG         +E    YQ +      
Sbjct: 354 KVYHALQPGDFVLIQFGHNDAGEINTGKARAELPGSGEESKVFLMEKTGKYQVIYTFGWY 413

Query: 279 IREYVAAAEAKGGIPVLVTSMHRRRFDEDGKIINTLEEYPEAMRQLAQEDGIALIDLNAM 338
           +R+++   + KG IP++++   R ++ +DGKI      + +  R+ A+  G   IDLN +
Sbjct: 414 LRKFIMDVQEKGAIPIVLSHTPRNKW-KDGKIERNTASFGKWTREAAEATGAYFIDLNKI 472

Query: 339 SKTLYEAWGVEASKKAFVHFPAGTFKGQMEDFADNTHFSTYGAYQLARCVVEGLRKTDLK 398
           S    E  G+   KKA  ++             D+TH S  GA+  A+ + +GL+  D  
Sbjct: 473 SADKLEKKGI---KKAADYYN-----------NDHTHTSLKGAHMNAKSIADGLKMADCP 518

Query: 399 LKKYLK 404
           LK+YLK
Sbjct: 519 LKQYLK 524



 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 68/250 (27%), Positives = 107/250 (42%), Gaps = 45/250 (18%)

Query: 185 PTVFLAGNSTV----VDQANEPWAAWGQMFPVFFKPGKVVIANHAESGETLKAFKGARRL 240
           P +FL GNST+    +   N     WG     +F   ++ + NHA  G + + F   R  
Sbjct: 44  PVLFLVGNSTMRTGTLGNGNNGQWGWGYYAGDYFDSNRITVENHALGGTSSRTFYN-RLW 102

Query: 241 ENVLSMMKPGDYLFIEFAHNDQKPGGSH-----------------------VEPFTTYQE 277
            +V+  ++ GD++ IE  HND  P  S                         E   TY E
Sbjct: 103 PDVIKGVQAGDWVIIELGHNDNGPYDSGRARASIPGIGKDSLNVTIKETGVKETVYTYGE 162

Query: 278 MIREYVAAAEAKGGIPVLVTSMHRRRF-DEDGKIINTLEE-YPEAMRQLAQEDGIALIDL 335
            +R ++   +AKG  P+L +   R  + D+D  II  + + +    +Q+A+E  +  IDL
Sbjct: 163 YMRRFINDVKAKGAHPILFSLTPRNAWADKDSTIITRVNKTFGLWAKQVAEEQNVPFIDL 222

Query: 336 NAMSKTLYEAWGVEASKKAFVHFPAGTFKGQMEDFADNTHFSTYGAYQLARCVVEGLRKT 395
           N +S   +E +G    K  F              + D  H S +GA   A    +G+R  
Sbjct: 223 NDISARKFEKFGKNKVKYMF--------------YIDRIHTSAFGAKVNAESAADGIRAC 268

Query: 396 D-LKLKKYLK 404
           + L+L KYLK
Sbjct: 269 EGLELAKYLK 278