Pairwise Alignments

Query, 503 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 361 a.a., HlyD family-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 21/285 (7%)

Query: 207 VAPATGRVSFSSGVLTEGSPVKEGQVLMTVSSTGLTSNNLGAEIQKARADYEQAKSEYER 266
           V     +V+FS G +     V+ GQ+L+ +           A +Q A+      + E++R
Sbjct: 70  VTDVATKVNFSDGDI-----VRAGQLLVQLQDA-----EQRARVQVAKVKVIDNQREFDR 119

Query: 267 KKELYESKIVPKSEFEQVEQKYQIAKTNYETLSSGYSGGGKQVTAPIGGFIKSIQAVNGG 326
            + L  S+ V + E ++++     ++   E   S      + +TAP  G +   Q   G 
Sbjct: 120 IRSLVTSQTVAELERDRLQTLIDTSRAELEQAESALRD--RAITAPFAGRLGLRQVSPGA 177

Query: 327 FANQGDALVTVTSHKSSLLEVQVSPKYSAELKNIRNIWYQPK--EGAWSNLNEKGGKILS 384
               G A+ T+    +  L+  V  ++  +L   + +  Q    EG         GK+ S
Sbjct: 178 LVTPGTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFT-----GKVTS 232

Query: 385 VDKEVEANQPLISVFAEV-NEGVEMPEGSFTEAQLAVGSAMESLVIPVSCLMEDYGNYSV 443
           +D  V  +   ++V AE+ N   ++  G   + +L + ++ E++++P S ++     + V
Sbjct: 233 IDSRVNPSTRAVTVRAEIPNPDAKLLPGMLMKIRL-IKTSREAIMVPESAIIPLQNRHYV 291

Query: 444 IVQLSGESFERRNVTLGKRNGSEVEIIKGLSFGEVVVTKGAYQVK 488
            +  +    +RR VT+G R     EI+ GL+ GE ++ +G  +V+
Sbjct: 292 YMVGADNKVDRREVTIGLRKRGWAEIVDGLALGETIMIRGILKVR 336