Pairwise Alignments

Query, 503 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 360 a.a., HlyD family-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 12/266 (4%)

Query: 223 EGSPVKEGQVLMTVSSTGLTSNNLGAEIQKARADYEQAKSEYERKKELYESKIVPKSEFE 282
           +G  VK+G +L+ + +         A+++ A+      + E  R   L  S+ V + E +
Sbjct: 80  DGDIVKKGDLLVQLQNAEQL-----AKVKVAQVKVSDNQRELARISSLVTSRTVAELERD 134

Query: 283 QVEQKYQIAKTNYETLSSGYSGGGKQVTAPIGGFIKSIQAVNGGFANQGDALVTVTSHKS 342
           +++      +   E   S  +   + + AP  G +   Q   G     G  + T+     
Sbjct: 135 RLQTLIDTTRAELEQAQSSLND--RSIVAPFNGRLGLRQVSVGSLVTPGTEISTLDDISK 192

Query: 343 SLLEVQVSPKYSAELKNIRNIWYQPKEGAWSNLNEKGGKILSVDKEVEANQPLISVFAEV 402
             L+  V  ++  EL+  + +  + K  A+ +   KG K++S+D  V      + V AE+
Sbjct: 193 IKLDFSVPERFIQELQPGKLV--EAKAVAFPDEIFKG-KVISIDSRVNPTTRAVIVRAEI 249

Query: 403 -NEGVEMPEGSFTEAQLAVGSAMESLVIPVSCLMEDYGNYSVIVQLSGESFERRNVTLGK 461
            N  + +  G   + +L +  + E+L++P S ++    ++ V         ER+ VT+G 
Sbjct: 250 PNHDLRLLPGMLMKVKL-IKRSREALMLPESAIIPIQKSHFVYSVNKDNVIERKQVTIGI 308

Query: 462 RNGSEVEIIKGLSFGEVVVTKGAYQV 487
           R    VEI  GL+ GE VV +G  +V
Sbjct: 309 RTRGWVEITDGLAIGENVVIRGLLKV 334