Pairwise Alignments

Query, 176 a.a., 16S rRNA processing protein RimM from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 37/160 (23%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 9   LGYIAKVHGLQGEVVAVLDVDYPENYEDIEHVFLEKNNRLAPYFLEHFVSQPNNRFLAKF 68
           +G +   +G++G +      D PE+  D    ++++      Y +E +  + N  ++ K 
Sbjct: 18  VGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGW-KRHNKGWVVKL 76

Query: 69  EGYDDKNAADTLVGTALYLPLKDLPALEDDQYYYHELVGFEVEDASKGVLGSVKEIYDLQ 128
           +G D +  A  L    + +    LP L +D++Y+ EL G +V   +   LG V ++ +  
Sbjct: 77  QGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLGVVTDMMETG 136

Query: 129 TQYLLGLD------YQGKEILIP-IQDDIILKVDKAAKKV 161
           +  +L +       +  KE LIP +++ +I  VD+ A+++
Sbjct: 137 SNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRI 176