Pairwise Alignments

Query, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 294 a.a., integrase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  284 bits (727), Expect = 1e-81
 Identities = 149/295 (50%), Positives = 206/295 (69%), Gaps = 3/295 (1%)

Query: 1   MLFSFINYLEHEKRASAHTVLAYEKDLEQFKEFLEQSFETADLTQAGHGEIRAWIVDLVE 60
           +L SFI YL HEKR S HT+ +Y+ DL+QF+E++  +F + +  +  H  +R+++VDL+E
Sbjct: 2   LLKSFITYLTHEKRYSQHTITSYQTDLDQFEEYINHTF-SLNFLEVKHVHLRSYMVDLME 60

Query: 61  QGLSATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLND 120
             +S  T+NRK++TLRSFYKFL R+GEI ++PT  ++A K  K+LP FV    MD LL+ 
Sbjct: 61  NKISEHTINRKISTLRSFYKFLQRTGEIDQNPTVLIKAPKIPKRLPVFVDTQKMDHLLDS 120

Query: 121 LEY-EAGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQGKTVKVYGKRKKQRIIPLT 179
             Y +  F   RD +V+E LY TG+RL+EL+ L   DIDI   T+KV GKR K+RIIP+ 
Sbjct: 121 EHYFDESFPSVRDHLVIELLYGTGMRLTELLQLKDTDIDIYSGTIKVLGKRNKERIIPVN 180

Query: 180 NTLIENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMIIYRIVRKYLDLFAQTSKRSP 239
             LI  + +Y  + K+  +  N     IVT +   AYP +IYRIV  YL+  +   K+SP
Sbjct: 181 KQLINQVNTYI-ELKKLQNFNNNLLILIVTNTGAAAYPKLIYRIVTSYLNHVSTNEKKSP 239

Query: 240 HLLRHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEKLKAVFDQAHPKA 294
           H+LRH++AT LLN GADLNA+K+LLGHA+LAATQVYTHNS+E+LK ++ QAHPKA
Sbjct: 240 HVLRHSYATSLLNAGADLNAIKELLGHASLAATQVYTHNSIERLKTIYKQAHPKA 294