Pairwise Alignments

Query, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 307 a.a., tyrosine recombinase XerC from Burkholderia phytofirmans PsJN

 Score =  145 bits (365), Expect = 1e-39
 Identities = 91/302 (30%), Positives = 162/302 (53%), Gaps = 18/302 (5%)

Query: 4   SFINYLEHEKRASAHTVLAYEKDLEQFKEFLEQSFETADLTQAGHGEIRAWIVDLVEQGL 63
           ++++ LEHE+R SAHT+  Y  +LE+ K+ L +      LT     +IR  +      GL
Sbjct: 9   AYLSNLEHERRLSAHTLRGYAHELEELKQ-LAKGRPLESLTPV---DIRGAVSRAHAGGL 64

Query: 64  SATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLNDLEY 123
           +A +++ +++  R+FY++L    ++  +P   +RA K +K LP+ +      +L+     
Sbjct: 65  TARSISHRLSAWRAFYRWLAGRVDLAANPVATVRAPKQAKPLPKALSVDDATRLMESPP- 123

Query: 124 EAGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQG-----------KTVKVYGKRKK 172
            A  EG RD  ++E  Y +G+RL+EL+GL  +  D  G             V+V GK  +
Sbjct: 124 AASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADGYRSAGWLKLDSAEVEVLGKGNR 183

Query: 173 QRIIPLTNTLIENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMIIYRIVRKYLDLFA 232
           +R++P+ +  +E + ++     +   +  +     ++    +  P ++   V++   +  
Sbjct: 184 RRVVPVGSKALEALGAWLAVRDQMVKH--DPHPLFLSARGNRLSPNVVRERVKRAALVAG 241

Query: 233 QTSKRSPHLLRHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEKLKAVFDQAHP 292
             +   PH+LRH+FATH+L    DL AV++LLGHA++ ATQVYT    + L  V+DQAHP
Sbjct: 242 IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAHP 301

Query: 293 KA 294
           +A
Sbjct: 302 RA 303