Pairwise Alignments

Query, 593 a.a., transcription termination factor Rho from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 419 a.a., transcription termination factor Rho from Klebsiella michiganensis M5al

 Score =  477 bits (1227), Expect = e-139
 Identities = 240/368 (65%), Positives = 296/368 (80%), Gaps = 3/368 (0%)

Query: 227 IENEGVLEIMSDGYGFLRSLDYNYLASPDDIYVSPSQIKLFGLKTGDNIKGQIRPPKEGE 286
           I  +GVLEI+ DG+GFLRS D +YLA PDDIYVSPSQI+ F L+TGD I G+IRPPKEGE
Sbjct: 49  IFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGE 108

Query: 287 KYFALLKVASVNGKTTEEIRDRIPFEYLTPLFPEERLNLTT---RADNFSTRIVDLFAPI 343
           +YFALLKV  VN    E  R++I FE LTPL    RL +       ++ + R++DL +PI
Sbjct: 109 RYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPI 168

Query: 344 GKGQRGMIVAQPKTGKTVLLQKIANAIAENHPECHLMILLIDERPEEVTDMARSVKAEVV 403
           G+GQRG+IVA PK GKT+LLQ IA +IA NHP+C LM+LLIDERPEEVT+M R VK EVV
Sbjct: 169 GRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVV 228

Query: 404 SSTFDEQAERHVKVSSMVLEKAKRMVECGHDVVILLDSITRLARAYNTVVPSSGKILSGG 463
           +STFDE A RHV+V+ MV+EKAKR+VE   DV+ILLDSITRLARAYNTVVP+SGK+L+GG
Sbjct: 229 ASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGG 288

Query: 464 VDANALHKPKRFFGAARNVENGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELSLDRK 523
           VDANALH+PKRFFGAARNVE GGSLTIIATAL++TGSKMDEVI+EEFKGTGNMEL L RK
Sbjct: 289 VDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRK 348

Query: 524 LSNRRIYPAIDVPGSGTRREDLLMEKEEMQRVWILRKLMSDMTSQEAMEFLLQRMKGTRD 583
           ++ +R++PAID   SGTR+E+LL  +EE+Q++WILRK++  M   +AMEFL+ ++  T+ 
Sbjct: 349 IAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKT 408

Query: 584 NAEFLISM 591
           N +F   M
Sbjct: 409 NDDFFDMM 416



 Score = 38.1 bits (87), Expect = 7e-07
 Identities = 18/46 (39%), Positives = 30/46 (65%)

Query: 3  NIEELKIRLLSELKEIAEELGVKNFKSLKKDDLIYAILDQQAITPE 48
          N+ ELK   +SEL  + E +G++N   ++K D+I+AIL Q + + E
Sbjct: 2  NLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGE 47