Pairwise Alignments

Query, 263 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 246 a.a., rhomboid family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query: 49  FLTYMFMHAGLWHLISNMFGLFIFGPLLEQFLGPKKLLTLWMVCGVGA 96
           F T+MF+H G  H + NM+ L+IFG  +E  +GP +    ++ CG+ A
Sbjct: 72  FFTHMFLHGGWGHFLVNMWTLWIFGDNIEDVMGPWRFTVFYLTCGLAA 119



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 10/99 (10%)

Query: 174 SNIPMVGASGALFGVLVAFGMLFPN----TQLFLLFPPMPIKAKYLVLFYGLYTVYNI-- 227
           S IP+VGASGA+ GVL A+ +L+P+    T + L+F P+      LV + G++ +  +  
Sbjct: 130 STIPVVGASGAIAGVLGAYFLLYPHARVTTLVLLVFIPLVFDLPALV-YLGIWFLVQLAS 188

Query: 228 ---IVNNPTDNVAHFAHFSGLIIGAILVTFWKKDRTSFY 263
               + +    +A +AH  G I G +L+  +++    ++
Sbjct: 189 GLSALGDEGAGIAWWAHLGGFIAGVLLLPLFRRPERCYF 227