Pairwise Alignments

Query, 497 a.a., cysteinyl-tRNA synthetase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

 Score =  350 bits (897), Expect = e-101
 Identities = 193/492 (39%), Positives = 286/492 (58%), Gaps = 41/492 (8%)

Query: 6   LKIYNTLSREKELFEPFKPPFVGMYVCGPTVYGDAHLGHARPAVTFDTVYRYLKHQGYKV 65
           LK+YNTL+R +E F+      V MYVCGPTVY + HLGH R  V+FD + RYL+H GY V
Sbjct: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61

Query: 66  RYVRNITDVGHLQGDADDGEDKIAKKAKLEQLEPMEVAQHYTDTYHRDMDLLNTFKPNIE 125
             V N TD+          +DKI K+A  ++ +P E+++ +   +  DM  L     +I 
Sbjct: 62  NLVINFTDI----------DDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIY 111

Query: 126 PRATGHIPEQIKLVQDILDAGFAYEVNGSVYFDVVKYNEEKPYGKLSGRVVEELMSGSRE 185
           P+ T HI E I  ++ +++ GFAY+    VYF+V K+   K YGKLS   +E+L+SG+R 
Sbjct: 112 PKVTEHISEIIAFIEKLIEKGFAYKTEDGVYFEVKKF---KNYGKLSNINLEDLVSGAR- 167

Query: 186 LDGQDEKRNPIDFALWKNAAPEHLMKWDSPWGVGFPGWHLECTAMSSKYLGDQFDIHGGG 245
           ++  ++K+N  DFALWK A P    KW+SP+G G PGWH+EC+AMSSKYLG+QFDIHGGG
Sbjct: 168 IETSEKKKNQKDFALWKTAKPGE-PKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGG 226

Query: 246 MDLMFPHHECEIAQGNAGHGHDPAKYWMHNNMITINGQKMGKSLGNFITLQELFNGKHDL 305
            DL FPHHE EIAQ +A  G D   YW+H   + +NG+KM KSLGNF+T+ +        
Sbjct: 227 RDLSFPHHENEIAQSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGD-------- 278

Query: 306 LEQAYSPMTIRYFILTAHYRSTLDFSNDALKAAQKGYKKIINGLRIAKDLHYVDAEGVAT 365
           + + YSP  +R+F +  HYRS +D++ +++   +   +KI N +   +       +    
Sbjct: 279 ISKEYSPEILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTW 338

Query: 366 DEKQ---VQQVEKSIENAYRAMNDDFNTAQAIGQLFNLLKKINSIFTGQLQAAALGKAVF 422
           DE +      ++ S  N Y AMN DFNT +A+  +F +   +N          +L K   
Sbjct: 339 DENEFLLYDILKNSKNNFYNAMNSDFNTVKALKSVFEVSNGVNKYL-------SLTKTPS 391

Query: 423 EKLI---QTFIVFVEDILGLVE----EKSDK-QQALLELLLKLYKEAKLAKDYDKVDEIR 474
           E L+     F   + +I GL E    E SD  ++  +  L++L  + +L K+Y+  D+IR
Sbjct: 392 EGLLLKALDFYKIIGEIFGLFENYFKESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIR 451

Query: 475 AALKSIGIVVKD 486
             LK++G  ++D
Sbjct: 452 DGLKNLGYQIED 463