Pairwise Alignments

Query, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 2e-37
 Identities = 90/327 (27%), Positives = 170/327 (51%), Gaps = 14/327 (4%)

Query: 31  TSKEPSKSPQSTPEAMTALPVDVVEVTPERLENNLNVTGNVLSNESVSLRAEITGLVESI 90
           ++KEP++ P        A+ V    V  +++  +L+V G + + +SV + AE+ G V+ I
Sbjct: 22  SAKEPNQPP--------AISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMI 73

Query: 91  NFEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKLYEGQESRQKQLLAREAISQEEYDII 150
             +  Q VKKG  L+ L+DD+  A L   +   +  + + +  ++LL R AI+  E D  
Sbjct: 74  AVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQ 133

Query: 151 LNQYNTTLSDIKLVKAQLDKTVIKAPFDGVLGLRQISAGSVISTTDIIANIVNIDPIKIE 210
             +     + +   +A L    I APFDG +G    S G  +S    +  + N+  ++++
Sbjct: 134 RARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLD 193

Query: 211 FSIPERYASQVQVGSTIEFSNNASHGLK-KGKVYAYEPVIDANTRTLTLRAISPNEDRKF 269
             IPERY  Q+  G  ++ S+ A   ++ +G V A +  I+  T  L +R   PN D++ 
Sbjct: 194 LQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRL 253

Query: 270 LPGMFVNIRFNLEVEEDALLVPSQSLIPELNGYK--LFLVNQEGIVQERQVQIGIRTDSE 327
            PGM ++ R +      A ++P Q+L  E +G K  ++++ ++ + + R+V +G R +++
Sbjct: 254 KPGMLMSARIHFPA-ISAPIIPVQAL--EYSGTKRFVYVIGEDNVAKRREVSLGARVENQ 310

Query: 328 VQILDGLSPGEMVLTTGVLQAKEGMKV 354
           V I  GL  GE ++  G++  ++  +V
Sbjct: 311 VVIEKGLQIGEKIVVQGIVNMRDNARV 337