Pairwise Alignments

Query, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (391), Expect = 2e-42
 Identities = 102/359 (28%), Positives = 177/359 (49%), Gaps = 11/359 (3%)

Query: 1   MKKQTKILVIVAIVVVIAVIFLFPRLQGGDTSKEPSKSPQSTPEAMTALPVDVVEVTPER 60
           MKK T  ++++AI++  +VI       G +  K+   +           PV VV   P  
Sbjct: 1   MKKWTFFMLLIAILLFGSVI-------GFNLFKQQKIAEYLANRPEPEFPVTVVTANPVD 53

Query: 61  LENNLNVTGNVLSNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLE 120
               +   G +  N+ V+L  E  G+++ I FE G  V K  PLV L+     A L   E
Sbjct: 54  WVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTE 113

Query: 121 YTKKLYEGQESRQKQLLAREAISQEEYDIILNQYNTTLSDIKLVKAQLDKTVIKAPFDGV 180
                 + +  R K L A+ +IS+E YD     Y    +DI+ +KA + +  IKAPF GV
Sbjct: 114 ARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGV 173

Query: 181 LGLRQISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIE-FSNNASHGLKK 239
           +G+R +  G  +     I  + +   +++ F++P+R  S++ +   ++ F +       K
Sbjct: 174 IGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFK 233

Query: 240 GKVYAYEPVIDANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPEL 299
           G + A EP +   +  + ++A  PN D K   GMF      L   E+ + +P  ++   L
Sbjct: 234 GSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTL 293

Query: 300 NGYKLFLVNQEG---IVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKVK 355
            G  +++V++E     VQ+  V++G R++S   IL+G+ PG++V+TTG ++   G KV+
Sbjct: 294 YGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVR 352