Pairwise Alignments

Query, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 361 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (468), Expect = 2e-51
 Identities = 116/356 (32%), Positives = 198/356 (55%), Gaps = 14/356 (3%)

Query: 6   KILVIVAIVVVIAVIFLFPRLQGGDTSKEPSKSPQSTPEAMTALPVDVVEVTPERLENNL 65
           K ++I  ++   A  + F   Q  +T K P   P  TP  + A      E+ P R E   
Sbjct: 3   KTIIISMLLAAGAATYYFT--QQTETPKGPRGRP--TPNVVVAK----AEMQPIRDEVEA 54

Query: 66  NVTGNVLSNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKL 125
             TG   +NES+++  ++T +V  INF +GQ V KG  LV L D E  A++       K 
Sbjct: 55  LGTGK--ANESITVTPKVTDMVTEINFNDGQMVDKGQLLVRLQDREQIARVTVARVKMKD 112

Query: 126 YEGQESRQKQLLAREAISQEEYDIILNQYNTTLSDIKLVKAQLDKTVIKAPFDGVLGLRQ 185
           +E + +R   L+  + ++  E D +    +T  +++   ++ L    I APF G LGLRQ
Sbjct: 113 HERELARISSLVTSQTVAALERDRLQTLIDTAKAELDQAESSLKDRRILAPFSGRLGLRQ 172

Query: 186 ISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIEFSNNASHG-LKKGKVYA 244
           +S GS+++   +I  + +I  IK++FS+PER+   + +G ++E S  A  G L  GKV +
Sbjct: 173 VSQGSLVTPGTVITTLDDISTIKLDFSVPERFLQSLAIGKSVEASAVAFEGELFTGKVVS 232

Query: 245 YEPVIDANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPELNGYKL 304
            +  I+  TR +T+RA  PN+  + LPGM + ++  ++   +AL++P  ++IP    + +
Sbjct: 233 VDSRINPTTRAVTVRAEIPNKGMRLLPGMLMKVKL-IKQSREALIIPEAAIIPIQKDHFV 291

Query: 305 FLVNQEGIVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEG--MKVKYNK 358
           +LVN E +V+ RQVQ+G+R    V+I+ G+  GE V+  G+L+ + G  +KV+Y++
Sbjct: 292 YLVNDENVVERRQVQLGLRKRGWVEIVGGVDVGEQVMVRGILKVRPGDTVKVQYSE 347