Pairwise Alignments

Query, 600 a.a., excinuclease ABC, C subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 639 a.a., Excinuclease ABC, C subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  279 bits (713), Expect = 3e-79
 Identities = 196/596 (32%), Positives = 304/596 (51%), Gaps = 38/596 (6%)

Query: 14  LPDVPGVYKYYNEEDKLIYVGKAKSLKKRVASYFVKSTGLNLKTRRMVKEIRRIEFTIVN 73
           +P  PGVY+  + +  ++YVGKA++LK+RV +Y  +   L ++ +RM+     +E    +
Sbjct: 40  MPSSPGVYRMIDGKGDVLYVGKARNLKRRVINY-TQPHRLPVRIQRMIAATLTMEVLTTH 98

Query: 74  SEFDALLLENNLIKKNQPRYNILLKDDKTYPYLLLTKEH-FPQLYPTRKLIPSRGTYFGP 132
           +E +ALLLE+NLIKK +PRYNILL+DDK++PY+ +T +H FP++   R  +   G YFGP
Sbjct: 99  TEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITSDHAFPRIVKFRGTLRKGGEYFGP 158

Query: 133 FASVKAMNNILELIRSLFTIRTCKLDLNPYKIAEQKYKVCLEYHIGNCLGPCEGLQGEPD 192
           FAS  A+ + L  ++  F +RTC        +   + + CL + I  C  PC     E D
Sbjct: 159 FASAGAVTSTLTALQKTFLLRTC-----ADNVFASRSRPCLLFQIKRCAAPCVDRVAEAD 213

Query: 193 YLKDIDQAKHILKGNLGIPKAYFKSKMQEAAEDLAFEKAQRFKDKLDLLEKYQAKSLVTN 252
           Y   +++A+  L G+    +     +M EAA+ L +E+A  F+D++  L   Q+   +  
Sbjct: 214 YKALVEEARAFLSGSSKALQHDLAKRMDEAAQALDYEQAAIFRDRIKALTNVQSHQDINL 273

Query: 253 PHVTDLDVFAIVSADKFAFVNYLNIKNGAINITKTVELKKKLDETEQELLLTAIFRLKDQ 312
           P + + DV A   A     V     + G  N  ++       DE   E+L   + +    
Sbjct: 274 PTLGEADVIACHQAGGQTCVQVFFFRGGRNNGNRSFFPAHAGDEGLPEVLEAFLGQFYAG 333

Query: 313 FQSDAK-EILSNIDLDDPIE---------GLHLTVPKIGDKRKLVELALKNAMYYKKEKA 362
           F    +  +L++I   D +E          + L VP+ G +RKL++ AL NA      +A
Sbjct: 334 FPPPREILLLTDIPHHDLVEQALCLRAGHRVRLVVPRRGSRRKLIDHALANA-----REA 388

Query: 363 LLSGKAKEKKNRVILQ-LQKDLSLKEAPDHIECFDNSNIQGAYPVASMVCFMDGKPAKKE 421
           L    A+    R +L+       L      +E +DNS+I G + V  MV        K  
Sbjct: 389 LGRRLAESSAQRTLLEGTAVAFGLDGPLQRVEIYDNSHISGTHAVGGMVVAGPEGFMKAA 448

Query: 422 YRHFHVKT--VEGPDDFASMTEIVGRRYKRLLKENK-----PLPKLIVIDGGKGQLSAAV 474
           YR F++++  +   DD+A M E++ RR+ R  KE+        P L++IDGG GQL+A  
Sbjct: 449 YRKFNIRSPDITPGDDYAMMREVMIRRFARARKEDPDRDRGQWPDLVLIDGGLGQLNAVR 508

Query: 475 EALKSLDIYGQVPIIGIAK------KLEEIYFPGDSFPLHIDKKSESLRLIQRVRDEAHR 528
           EAL  + +   VP++G+AK        E  + PG   P  +      L  IQR+RDEAHR
Sbjct: 509 EALAEIGV-EDVPLVGVAKGPDRDAGRERFFVPGRP-PFMLRHNDPVLYFIQRLRDEAHR 566

Query: 529 FAITFHRDIRSKDSFKTALDTIEGIGPSTSNKLLKHYKSLKKIREASEEDLAQIIG 584
           FAI  HR  RSK    + LD++ GIG S    LL H+ S K + +A   DL  + G
Sbjct: 567 FAIGSHRTRRSKAIGVSPLDSVPGIGASRKKALLHHFGSAKAVSQAGLTDLEAVEG 622