Pairwise Alignments

Query, 423 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 370 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.4 bits (189), Expect = 7e-19
 Identities = 104/410 (25%), Positives = 159/410 (38%), Gaps = 91/410 (22%)

Query: 1   MKKLLLSTLMAGALAVGANAQNDFNKWSIDVNGGFNKPMAPMSPGYYSPSLNLGHA---- 56
           MK  L   L+   L + A+A  +   W +    G N         Y   + + G      
Sbjct: 7   MKNTLKVVLLTSMLPLAASASQELTPWYVGAGLGVNN--------YEHIATDNGDDNPYA 58

Query: 57  -DVGVRYMFNEKFGAKVDYGFGKYQNADETPSFETNYYRVNLQGVANLGRVFNFETWTKT 115
            D+   YMFN+ FGA++  G+    +AD T             G++N   V        T
Sbjct: 59  WDIFAGYMFNDYFGAEI--GYRDLGSADWTTG-----------GISNDAGVKG-----AT 100

Query: 116 VGLLTHFGAGFGRVTPQENEWADFKDDTYNFIFGFTPQVRLGNRVSLNGDISMLVAGRQN 175
           +GL+                             G  P   LGNR SL+ +   +    +N
Sbjct: 101 LGLV-----------------------------GVWP---LGNRWSLSAEAGAMYYTLEN 128

Query: 176 VAFDGHTSVLPTDPGYYGANAVSWTGT-LGLSFYLGGHDVHADWYVRQSQYATKDELESQ 234
               G TS       Y   +   + G  +G +F         D    Q++Y   + L+  
Sbjct: 129 SQHTGTTS-----SSYSSNDFAPYVGAGVGYNF--------TDNLKLQAKYRRYENLDDT 175

Query: 235 IGEIKDMLKDSDGDGVPDYLDKEPNTPAGARVDSHG----RTLDSDGDGIPDHSDDCAFV 290
             +   +  DS+  G+   L     TPA A   +        +DSD DG+ D  D+C   
Sbjct: 176 --DFNTIEADSNYWGLE--LSYRFGTPAAAAPVAAAVVAAAPVDSDNDGVYDDKDEC--- 228

Query: 291 PGPASNNGCPVEEVDETDFFKKAINEGYVNVYYAFDSAKPLGYSSSSVNYVANFLKRNPG 350
             PA+     V+ V  T +      E   ++ +A DSA         +  +AN++ +NP 
Sbjct: 229 --PATPATHKVDSVGCTLYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMNKNPE 286

Query: 351 VNVAIKGYADEIGPDDYNMKLSEKRAKAVYDLLVAA-GIDASRISYKGYG 399
             V I G+A  +G  +YNM LS+KRA AV  +LV   GI  SR++  GYG
Sbjct: 287 FTVEIAGHASNVGKPEYNMVLSDKRADAVAKILVEKYGISQSRVTSNGYG 336