Pairwise Alignments

Query, 423 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 196 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 22/184 (11%)

Query: 243 KDSDGDGVPDYLDKEPNTPAGARVDSHG--RTLDSDGDGIPDHSDDCAFVPGPASNNGCP 300
           +D+D DGVPD  D  PNTPA   V ++G    ++   D I  + +D    P   S + C 
Sbjct: 28  QDTDQDGVPDIKDACPNTPANTSVMANGCVDEVEVTSDNIQCNLND----PSTYSASDC- 82

Query: 301 VEEVDETDFFKKAINEGYVNVYYAFDSAKPLGYSSSSVNYVANFLKRNPGVNVAIKGYAD 360
                     + AI      VY+ F  A+       ++  V +FL+ N    + + G+ D
Sbjct: 83  -------HHIETAI------VYFEFAIAEVDLSQWKALALVKSFLEANTETKLTLVGHTD 129

Query: 361 EIGPDDYNMKLSEKRAKAVYDLLVA-AGIDASRISYKGYG-EDTSVDKQSADARQLARRA 418
            +G  ++N +LS +RA+ V  +LV   G + +R +  G G  +   D +S++ R L RR 
Sbjct: 130 IVGTPEFNYQLSLQRAQNVKRILVEDYGFNPNRFTVVGKGISEPVADNRSSEGRGLNRRV 189

Query: 419 SFEV 422
            F V
Sbjct: 190 QFIV 193