Pairwise Alignments

Query, 1053 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1337 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  253 bits (645), Expect = 9e-71
 Identities = 258/1072 (24%), Positives = 445/1072 (41%), Gaps = 108/1072 (10%)

Query: 29   FREYGAAQGINQPFPYDILHSQSGYVWVAGENGLWKFDGQDFQHYA---HEVKDSTSLAF 85
            F       G++      I+    G++W   +NGL +FDG          H++K   +   
Sbjct: 29   FTHINGDNGLSSSNVKAIIQDSYGFMWFGTKNGLNRFDGTSILRMNCEDHQLKKGNNN-- 86

Query: 86   DFVWVLFEDSKNNIWAGTYGGGVSKYDPRTDRFTNYSYQKNNLNSLSDDQVRGIAEDPKG 145
              +  L+ED+   +W GT   GV  Y P +D FT+ + QK       D+ V  I  D +G
Sbjct: 87   --ISALYEDANRTLWVGT-DRGVYLYHPASDVFTHIN-QKTKEGKTMDNWVSAIVGDTQG 142

Query: 146  NIWLGTSNGLCQLNPDTGDFTRYTTADGLLSKTIRQIKLSADHSRLFIATGNG------- 198
            NIW+        + PD G F RY   +    +   + +   +         NG       
Sbjct: 143  NIWV--------IIPDQGIF-RYKDNELYFYEISNRRQFKQESPNCICVRENGEVWIGFW 193

Query: 199  -LNILNLATMEFSGIKHLPDQP-QSLSHFYIYDILEYPKGILWVGTGGGLDKLNLKTGHI 256
             L I        S  + + D+  + L    I  I EY   ++     G L K N K+   
Sbjct: 194  GLGICRYNPQNDSFEQIVEDRDGRPLVGKNINSICEYGDWLIMAANEGELIKYNTKS--- 250

Query: 257  THYQSDADPTTLSHDVIFSIAHHPDHPDKLFVGTLDGLNVLHLRKDTFSRIHSDQANPHK 316
             H   D       +    ++A+      K+++GT +GL V+  +K+    +  D      
Sbjct: 251  -HVLEDIKVAGADNTFYTTVAYMKG---KIWLGTFNGLYVIDEKKNEVVSLKEDLMRSFS 306

Query: 317  LQGDNIYKVSAGRDGSLWVAVYNEGIFQYHPHYH-KFNSVDLVTDATDKYYSRVSSMIQH 375
            L    IY +    +G +W+     G+  Y P+ + +F+     +        R+  + + 
Sbjct: 307  LSDKMIYSMCQDSEGGIWIGTLFGGV-NYLPNRNLQFDKFVPGSSGNSLNTKRIRELAED 365

Query: 376  DEDE-YLFTTYSGLFVQNIKTGKTAKYTISTGDQSSVNRLAMITRIT-PDIYWISTWAHF 433
             +   ++ T  +G+ V N++ G   +      D  S N L  +  +   D  +   +   
Sbjct: 366  VKGNIWIGTEDAGISVLNVENGVIRQVK----DHKSGNHLVTLAVVPFQDQIYCGLFKAG 421

Query: 434  VYEWNHQTKSLRPLSHQTPEGHFLPEFNLPILH-DSQERTWIGNSEKGLFIWNPTTQTAD 492
            +        ++R   H TP    + E ++ + H D + R W+G        W      A 
Sbjct: 422  LDVIQVPGYTVR---HYTPSELKIGEGSVYVFHIDRKGRKWLGTG------WGLYVAEAG 472

Query: 493  PFPIGDTLIQGDNHDEFISYIFEDSQQRLWVGSQG-GLNLLNETDHSFTKFAHKDGDANS 551
             F   +    G N   +I  + E     +W+ + G G+   +    S+ K+  K+ + + 
Sbjct: 473  SFNFVNVKETGYN---WIFDLCEGKDGSVWIATMGSGVWRYSPQTDSYKKYESKENEPDG 529

Query: 552  LSNNKVNHISEDHAGNLWVSTELG-LSKFNPTDSSFTNFYTHDGLPSNVISSTLEDARHN 610
            LS+N V+ + +D  G +W ST+ G +  +N    +F  +   +GLP +V    LED   N
Sbjct: 530  LSSNSVSSVMQDSKGRVWFSTDRGGICYYNEEKDNFVTYSIKEGLPDDVAYKILEDEEGN 589

Query: 611  IWVATAEGLSVLDREGN-FRNYNQQDGLMDNYFIFRAAYKDSQGNLFFGSSSGLEYFDPL 669
            +W  T  GL     + N  R +  +DGL+ N F +++A K   G  +FG   GL  FDP 
Sbjct: 590  LWFGTNRGLVRFHPDKNDIRVFTTKDGLLGNQFNYKSALKARNGKFYFGGIDGLVAFDPR 649

Query: 670  KIPENTKPPSVQITGIDLFNTRITPGDSSGILDRAIPYTDEISLTHEQSVISFHFTALNL 729
            +   +   P + I+   ++N  +T   +   L   I +TD I L +++S ISF    L+ 
Sbjct: 650  EAKTDDFVPPIYISKFSIYNKEVTVHTADSPLKECITHTDRIVLNYDESNISFDVALLSY 709

Query: 730  INGHKNKFQYQLKGYDKSWRPLTTQRSTTYTNLPPGHYTFQVKACNNDGFWSTQHASIGL 789
                 N++ Y++   DK W    T ++ +Y  LPPG YTFQVKA +ND        S+ +
Sbjct: 710  STAEANQYYYRMAPIDKDWIKAATNQNISYAKLPPGQYTFQVKATSNDNGGQFVERSLSI 769

Query: 790  TILPPWYLTWWFKTLFTIALLGTIL--YQYQRIEKNKERLENLVVQRTAEIQQQKEQIET 847
             ILPPW+ + W    + I L+  ++  + + +  K KE  E    Q+  EI+++KE  E+
Sbjct: 770  EILPPWWFSPWAYVFYFIWLVCVVVSWFFWYKHRKEKEMEER---QKLFEIEKEKELYES 826

Query: 848  QHDSLQEKNQRIESLLRELNHRVKNNLQLVSSIL-NLQSRSVKD----KNAKVALIDGRM 902
            +            +   E+ H V+  L L++  L  LQ   + D    KN  V +     
Sbjct: 827  K-----------VNFFTEIAHEVRTPLTLINGPLETLQEMEIADPKIQKNLSV-ITQNTN 874

Query: 903  RMQALS---LLHQKLYVSDNDSQVNCKTYISDLFDQI---EAAFKSRYKTLQYNFEGDDF 956
            R+  L+   L  QK+     +  + C    S L + +   E     + K L  +   +  
Sbjct: 875  RLLTLTGQLLDFQKIGAHKFEMTMECVDITSLLRETVARFEPTISKKNKELALHIPEESI 934

Query: 957  SLGLDKAIPLGLILNELITNSFKHVQDEKIEIHLSLKLEEQLVHFTFWDNGDGLTSH--- 1013
               +DK   +  IL+ L+ N+ K+ +   I + L  + E  LV  T   +GD + +    
Sbjct: 935  EAVVDKE-AITKILSNLLNNALKYAR-HSICVELQRETEAFLVRVT--SDGDKIPAEISQ 990

Query: 1014 ---------TIRESNSF----GWSMIRSLVLQLHGK--LDIKESQNTKILLI 1050
                       ++S SF    G  + RSL     GK  LD +   N+ +L +
Sbjct: 991  QIFEPFYQAAKKDSASFGVGIGLPLARSLASLHRGKLYLDSEHEDNSFVLSV 1042



 Score = 54.7 bits (130), Expect = 4e-11
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 8/133 (6%)

Query: 529 LNLLNETDHSFTKFAHKDGDANSLSNNKVNHISEDHAGNLWVSTELGLSKFNPTDSSFTN 588
           L  ++  ++S   F H +GD N LS++ V  I +D  G +W  T+ GL++F+ T     N
Sbjct: 16  LQKVSGEENSSYYFTHINGD-NGLSSSNVKAIIQDSYGFMWFGTKNGLNRFDGTSILRMN 74

Query: 589 FYTHD-GLPSNVISSTLEDARHNIWVATAEGLSVLDREGN-FRNYNQ---QDGLMDNYFI 643
              H     +N IS+  EDA   +WV T  G+ +     + F + NQ   +   MDN+  
Sbjct: 75  CEDHQLKKGNNNISALYEDANRTLWVGTDRGVYLYHPASDVFTHINQKTKEGKTMDNW-- 132

Query: 644 FRAAYKDSQGNLF 656
             A   D+QGN++
Sbjct: 133 VSAIVGDTQGNIW 145