Pairwise Alignments

Query, 528 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 552 a.a., RagB/SusD family nutrient uptake outer membrane protein from Phocaeicola vulgatus CL09T03C04

 Score =  134 bits (338), Expect = 7e-36
 Identities = 156/587 (26%), Positives = 248/587 (42%), Gaps = 107/587 (18%)

Query: 7   IFIFLLGILGTSCEDFLSTEPTNF--IAPEYSTIAELETGLAGVYDVLGSQATYGDVIPY 64
           I   +  +  TSCEDFL+ E      +   + +  E E  + G Y  +    T+G     
Sbjct: 7   ILTMIASLTFTSCEDFLTEEVRGQQNLDTYFQSAEEAEAFITGCYQAI----TFGG---- 58

Query: 65  WLNVST---------DIGYTNTGQLNTTAYIYTA-------TDAQITNLWKTLYQGIYRA 108
           W N++T         D G+      + + YI  A       ++  I+N W+  Y+GI R 
Sbjct: 59  WWNINTVWLLSEMCSDDGWMGNTSQSQSDYISLAHYQGTGQSNGAISNFWQYRYKGILRC 118

Query: 109 NLVLAKVDNPEL-DEEARNRIKGQALFLRGYYYFLLVKNYGSVPMLLTDKPDISNVNIPR 167
           N+ + ++   +  DEE +NR+  +A FLRGY+YF LVKN+G VP++           I R
Sbjct: 119 NIAVERISQADFSDEEMKNRLVAEARFLRGYFYFELVKNFGGVPLITGFLLPEEIQGITR 178

Query: 168 SPVEDVYTQILQDMKEAESLVEEAEHLSGG--GRISRSTVQGILARVCLTMAGHPLKDES 225
           +  EDVY  I  D+K A  ++ +    +    GR +R    G+L +V L         +S
Sbjct: 179 ASAEDVYKFIEDDLKAAADVLPQRSQYAATDMGRATRGAALGLLGKVYLY--------QS 230

Query: 226 RYAEALEWAQKVQKSKMHELNPDYSNVFIRYARDEYDIKESIWEVEFY--GLLSSGSQEY 283
           ++ EA +  + V     ++L  ++ +V   +  D  + +ES++EV++   G  + G    
Sbjct: 231 KWQEAHDVLKTVIDEGEYKLLDNFGDV---WDVDHNNSEESLFEVQYMYDGTYALGG-SL 286

Query: 284 TYYIGARGGIRSG---------DEQIGYSGGAVLATKWLFDLYEIDEGSTETPKESP-DL 333
           T   GAR G   G          EQ     G     +W      I  G TE   E+  D 
Sbjct: 287 TVITGARSGPGDGWSWGQPTANLEQAYIDAGDTERLRWTI----IKTGCTEIAGENNFDK 342

Query: 334 RRDWNIAPFTYVGVPGVQTYNPDLW------RRTMGKWRREYETLTPKDRVVSAQNFP-- 385
             + N     Y        ++P+ +       ++    R+ +  +  +  V +    P  
Sbjct: 343 FVENNTKIANYKDYIEKYGWDPECYIIDPSQHKSARIVRKYFVPIEKRPEVYNIDKIPLD 402

Query: 386 --ILRYSDVLLMIAEAENEVNGPTDVAYEAINQVRRRAYGLLLPAPPNPDVNADLPPGLS 443
             ILRY+DVLLM AEA NE+ G    A   +N+VR R   + LPA  +           S
Sbjct: 403 HRILRYADVLLMYAEACNEL-GEDGTARTYLNEVRNR---VKLPAVTS-----------S 447

Query: 444 KEEFFQAIVDERAREFCFEASRRSDYIRW----------------GTFV-----DRMKEY 482
             E  +AI  ER  E  +E +R  D  RW                GTFV        ++ 
Sbjct: 448 GNELRKAIRLERRLELAWEQNRIYDIRRWTDDNGKKMICNLMGANGTFVKYNTDPATRDI 507

Query: 483 KDWALANGAVQGHVLAQTNISERNYLLPIPTAEMAL-NKALTQNPGY 528
            +W     A    +    N   R+ + PIP  E+ + N ++TQNPG+
Sbjct: 508 YEWENQGEASDKGISFNEN---RDMVFPIPLYEITMSNGSITQNPGW 551