Pairwise Alignments

Query, 818 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1076 a.a., HsdR family type I site-specific deoxyribonuclease (RefSeq) from Shewanella sp. ANA-3

 Score = 52.4 bits (124), Expect = 1e-10
 Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 51/245 (20%)

Query: 166 RSPRYYQQIAVNRTVE--------AVANGQGRI--LLVMATGTGKTYTAFQIIHRLWKSR 215
           RS +YY   A++  V         + AN   R+   +   TG+GKT T+F+    + +S+
Sbjct: 265 RSYQYYAANAISDKVAKTNWQQLGSAANNPDRLGGYVWHTTGSGKTMTSFKSAQLIAQSK 324

Query: 216 AKKRILFLADRTALIDQTRRGDFKHF-----------KDKMTIIKKKVVSRAD----GKE 260
              +++FL DR  L  Q+   ++++F              + + K K  S AD       
Sbjct: 325 DADKVIFLMDRIELGTQS-LAEYRNFAGDGEDVQATENTHVLVTKLKSTSPADTLIVSSI 383

Query: 261 ELVSNNKRGIDTEDKAYEVFLGLYQGLTNASDIEDAYKDFSPEFFDLIVIDECHRGSAKE 320
           + +SN    +D E  A           TN++DIE            + +IDE HR +  +
Sbjct: 384 QKMSNIFEEVDDEGTA-----------TNSADIEKIRAKRL-----VFIIDEAHRSTFGD 427

Query: 321 DSAWREILRYFNKATHIGLTATPKETKEVSN----IEYFGDPIYTYSLKQGIDDGFLA-- 374
                 I R F +A   G T TP + +   N       FG+ ++ YS+  GI DG +   
Sbjct: 428 --MLIIIKRTFPRALFFGFTGTPIQEENEKNGNTTSTVFGNELHRYSIADGIRDGNVLGF 485

Query: 375 -PYRV 378
            PY+V
Sbjct: 486 DPYKV 490