Pairwise Alignments

Query, 640 a.a., ATP-dependent DNA helicase, RecQ family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score =  283 bits (725), Expect = 1e-80
 Identities = 155/347 (44%), Positives = 215/347 (61%), Gaps = 1/347 (0%)

Query: 1   MKTKALSVLKKVFGYDDFRPMQLDIVLSVAAGKDTLALLPTGGGKSICFQVPALMQEGIC 60
           M  +A  +LK VFGYD FR  Q  I+  V +G D L L+PTGGGKS+C+QVPAL+++G+ 
Sbjct: 1   MLDQAQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLRDGLA 60

Query: 61  VVVSPLIALMKDQVDNLRKRGVLATAIYSGMRKREIDTTLDNCIYGNYKFLYVSPERLKS 120
           VVVSPLIALM DQV  L + GV A A+ S +   E     +       K LY++PERL  
Sbjct: 61  VVVSPLIALMDDQVATLDELGVSAVALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQ 120

Query: 121 DLFIERFKRMKVNMVAIDEAHCISQWGYDFRPPYLEIAALREYHPDTPFIALTASATLQV 180
              +   +R+++ + AIDEAHC+SQWG+DFRP Y+++  L E  P  P IALTA+A ++ 
Sbjct: 121 PRMLAFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRT 180

Query: 181 KQDILEKLALRDPAVFVKSFARKNLSYAVRKAENKLEKAIEIL-QKVGGSAIVYVRSRKA 239
           +++I+++L L +   F+ SF R N+ Y +   E   ++ +  L ++ G + IVY  SRK 
Sbjct: 181 REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK 240

Query: 240 TKELAQALYRLGISATFYHAGLDKQLREQRQMEWKNNKVRVMVATNAFGMGIDKPDVRVV 299
             + A  L   G  A  YHAGL  +LR   Q  + N +  +MVAT AFGMGIDKP+VR V
Sbjct: 241 VDDFAAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV 300

Query: 300 IHVDLPENLENYYQEAGRAGRDEWKAFAVLLYQDKDLEVLVERAEQS 346
            H+DLP++LE YYQE GRAGRD   A A + Y  +D+  L +    S
Sbjct: 301 AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNS 347



 Score = 36.2 bits (82), Expect = 5e-06
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 521 ERRDTSVEKAK--AMVAYVTNTTMCRTRQLLAYFGEVSDTSCGVCDVCLE 568
           + R   VE+ K  AM+A +   T CR + LLAYF E   + CG CD C++
Sbjct: 350 DERHKRVEQHKLDAMLA-LCEETRCRRQALLAYFDEELPSPCGHCDNCVD 398