Pairwise Alignments

Query, 640 a.a., ATP-dependent DNA helicase, RecQ family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

 Score =  294 bits (752), Expect = 9e-84
 Identities = 147/333 (44%), Positives = 217/333 (65%), Gaps = 1/333 (0%)

Query: 8   VLKKVFGYDDFRPMQLDIVLSVAAGKDTLALLPTGGGKSICFQVPALMQEGICVVVSPLI 67
           VL +VFGY  FR  Q +++ +  AG+D+L ++PTGGGKS+C+Q+PAL+ EG+ +V+SPLI
Sbjct: 19  VLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLI 78

Query: 68  ALMKDQVDNLRKRGVLATAIYSGMRKREIDTTLDNCIYGNYKFLYVSPERLKSDLFIERF 127
           +LMKDQVD L+  GV A  + S + + E+    +    G  K LYVSPER+ +  FIER 
Sbjct: 79  SLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERL 138

Query: 128 KRMKVNMVAIDEAHCISQWGYDFRPPYLEIAALREYHPDTPFIALTASATLQVKQDILEK 187
             + + M+A+DEAHCISQWG+DFRP Y  +  L++  P+ P +ALTA+A    + DI+++
Sbjct: 139 SHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQR 198

Query: 188 LALRDPAVFVKSFARKNLSYAVRKAENKLEKAIEILQ-KVGGSAIVYVRSRKATKELAQA 246
           L L +P  ++ SF R N+ Y + +    + + I  L+ + G   I+Y  SRK  + L + 
Sbjct: 199 LQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLTEK 258

Query: 247 LYRLGISATFYHAGLDKQLREQRQMEWKNNKVRVMVATNAFGMGIDKPDVRVVIHVDLPE 306
           L    I A  YHAG+D   R   Q  ++ + ++++VAT AFGMGI+KP+VR V+H D+P 
Sbjct: 259 LCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPR 318

Query: 307 NLENYYQEAGRAGRDEWKAFAVLLYQDKDLEVL 339
           N+E+YYQE GRAGRD   A A++LY   D+  L
Sbjct: 319 NIESYYQETGRAGRDGLPAEAMMLYDPADMNWL 351



 Score = 46.2 bits (108), Expect = 4e-09
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 511 RLPLNTKRIAERRDTSVEKAKAMVAYVTNTTMCRTRQLLAYFGEVSDTSCGVCDVCLEKK 570
           R  L+ K    ++     K  AM A+    T CR + LL YFGE  D  CG CD+CL+  
Sbjct: 352 RRMLDEKPDGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRDKPCGNCDICLDPP 410

Query: 571 KAANAPNYQEEVREKL 586
           K  +A    EE R+ L
Sbjct: 411 KRFDA---TEEARKAL 423