Pairwise Alignments

Query, 640 a.a., ATP-dependent DNA helicase, RecQ family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 33/350 (9%)

Query: 14  GYDDFRPMQLDIVLSVAAGKDTLALLPTGGGKSICFQVPALMQ-----------EGICVV 62
           GY    P+Q + + ++  G+D LA   TG GK+  F +P L +               ++
Sbjct: 20  GYQKMTPIQKEAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMFDSPSDTQRSNTRALI 79

Query: 63  VSPLIALMKDQVDNLRKRG----VLATAIYSGMRKREIDTTLDNCIYGNYKFLYVSPERL 118
           ++P   L+    DN+++      +    +Y G++   +DT       G    +  +P RL
Sbjct: 80  LAPTRELVAQVADNIKQYSRYLPISVLTVYGGVK---MDTQAAKVKKGA-DIIVATPGRL 135

Query: 119 KSDLFIERFKRMKVNMVAIDEAHCISQWGY--DFRPPYLEIAALREYHPDTPFIALTASA 176
              L         V+ + +DEA  +   G+  D +    ++   R+   +  F A  +SA
Sbjct: 136 LEHLQACNLNLSNVDFLVLDEADRMLDMGFITDIQKILQQVNRDRQ---NLLFSATFSSA 192

Query: 177 TLQVKQDILEKLALRDPAVFVKSFARKNLSYAVRKAENKLEKAIEILQKVGGS-----AI 231
             Q+  ++L K  L   AV  ++     +S  V   E + ++  E+L ++ G       +
Sbjct: 193 VKQLANEMLVKPKLI--AVDKQNTTAVTVSQVVYPVEQRRKR--ELLSELIGKKNWQQVL 248

Query: 232 VYVRSRKATKELAQALYRLGISATFYHAGLDKQLREQRQMEWKNNKVRVMVATNAFGMGI 291
           V+  +R+A   L + L   GI +   H+   +  R +   E+K  KVR +VAT     G+
Sbjct: 249 VFTATREAADVLVKELNLDGIPSAVVHSEKAQGNRRRALREFKEGKVRALVATEVAARGL 308

Query: 292 DKPDVRVVIHVDLPENLENYYQEAGRAGRDEWKAFAVLLYQDKDLEVLVE 341
           D P++  V++ DLP   E+Y    GR GR      A+ L   ++   L +
Sbjct: 309 DIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSREEERTLAD 358