Pairwise Alignments

Query, 640 a.a., ATP-dependent DNA helicase, RecQ family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

 Score =  249 bits (635), Expect = 4e-70
 Identities = 175/598 (29%), Positives = 299/598 (50%), Gaps = 35/598 (5%)

Query: 3   TKALSVLKKVFGYDDFRPMQLDIVLSVAAGKDTLALLPTGGGKSICFQVPALMQEGICVV 62
           T   S+L++ FG+D FR  Q ++V  + +G  +LA+ PTG GKS+C+Q  AL    + +V
Sbjct: 12  TDYASLLQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFTALQLPHLTLV 71

Query: 63  VSPLIALMKDQVDNLRKRGVLATAIYSGMRKREIDTTLDNCIYGNYKFLYVSPERLKSDL 122
           VSPL+AL+KDQ+  L ++G+ A +I S +        + +  YG  K L VS ER K++ 
Sbjct: 72  VSPLLALIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLMVSVERFKNER 131

Query: 123 FIERFKRMKVNMVAIDEAHCISQWGYDFRPPYLEIAALREYHPDTPFIALTASATLQVKQ 182
           F +  + + ++M+ +DEAHCIS+WG++FRP YL++   R        + LTA+AT +VK 
Sbjct: 132 FRQFIQSIPISMLVVDEAHCISEWGHNFRPDYLKLPDYRRELAIPLVLLLTATATRKVKL 191

Query: 183 DILEKLALRDPAVFVKSFARKNLSYAVR--KAENKLEKAIEILQKVGGSAIVYVRSRKAT 240
           D+  +  ++   +    F R NL   V    +++KL    + L    G+ IVYV  +   
Sbjct: 192 DMAARFDIKPQHIVQTGFYRSNLDLTVLPVASQHKLTALQQQLNLFTGTGIVYVTLQHTA 251

Query: 241 KELAQALYRLGISATFYHAGLDKQLREQRQMEWKNNKVRVMVATNAFGMGIDKPDVRVVI 300
           +++A  L ++G  A+ YHAG + + R+Q Q ++   K+R++VAT AFGMGIDK ++R V+
Sbjct: 252 EDVAAKLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGMGIDKSNIRFVV 311

Query: 301 HVDLPENLENYYQEAGRAGRDEWKAFAVLLYQDKDLEVLVERAEQSYPPIDFIKRVYQSL 360
           H DLP+++ENY QE GRAGRD   +  V L     +  +        P +  I  V  ++
Sbjct: 312 HYDLPKSIENYCQEIGRAGRDGLLSHCVTLANLDGINTVENFVYGDTPELASIAAVIDNI 371

Query: 361 ANYYRIAVGSSLMVSYDFDIIAFTNTYHLDLLMTYNALKILQEEALVELSEGYYSPSTFH 420
                     +    ++  +   +N  ++  L     L  L+   +++    YY+  ++ 
Sbjct: 372 RE-------ETHNGRWELQLHQLSNVSNIRQLPLKTLLVQLEMMGVIKPLYAYYADISYR 424

Query: 421 FLIGQSRLYEY--QIAHAALDPVI--KVLLRMYGGELFSEYLKI----REDKLATVLNIP 472
           F+  Q+++         A L+ +     + R++G   FS   +     R   LA +  + 
Sbjct: 425 FIEPQAQILSQFSPERQAFLNDIFTHTQMKRVWGSLDFSALYQATGAERTRVLAALEYLA 484

Query: 473 EREVVKLLERMDNLDIAAYNKK-KDQPQVTFLTHRYDAGRLPLNTKRIAERRDTSVEKAK 531
            +++++ LE     D+   N +   Q  +    H+Y   +      RIA+          
Sbjct: 485 SQQLIE-LEAKRVTDVYQVNAEVLAQGHLADELHQYFTDKEAKEVARIAQ---------- 533

Query: 532 AMVAYVTNTTMCRTRQLLAYFGE-VSDTSCGVCDVC---LEKKKAANAPNYQEEVREK 585
            +V +   TT C    L  YF +  +  SCG C VC   L K   +  P + ++ + K
Sbjct: 534 -LVRFFELTT-CLNYNLARYFDDNAAPQSCGHCSVCRGQLAKLAYSEVPKWPDDAQLK 589