Pairwise Alignments

Query, 205 a.a., ribonuclease D from Caulobacter crescentus NA1000 Δfur

Subject, 368 a.a., ribonuclease D (RefSeq) from Shewanella loihica PV-4

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 15  FADAEIIAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYDCPNLKALLTNPKVL 74
           +  A+++ +D+E +  R     L ++Q+  G+  A +  ++  D       ALL    ++
Sbjct: 19  YRQAKVLMLDTEFVRTRTYYAKLGLIQVYDGETLALIDPVAVSDLSA--FWALLERDDMI 76

Query: 75  KLFHFGRFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGLKDVTRELLGVELSKVQQ 134
            + H    D+ +   +       ++ ++IA+     +    G   +    LGV+L K + 
Sbjct: 77  SVLHSCSEDLEVLARYGRCQPKVLFDSQIAAAFCG-WGHGMGYAKLVEHCLGVQLDKGES 135

Query: 135 SSDWGAPSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRM 175
            +DW    LS  Q+ YAA+DV +L+ L  +L   L+  GRM
Sbjct: 136 RTDWMKRPLSDAQLQYAANDVDYLYRLYPQLLEKLQESGRM 176