Pairwise Alignments

Query, 205 a.a., ribonuclease D from Caulobacter crescentus NA1000 Δfur

Subject, 203 a.a., 3'-5' exonuclease (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  255 bits (651), Expect = 4e-73
 Identities = 127/204 (62%), Positives = 156/204 (76%), Gaps = 1/204 (0%)

Query: 1   MANFVHEGDLPDGVFADAEIIAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYD 60
           M N +H  DLPDG+     ++AID+ETMGL   RD LCVVQLS+GDGDAH+V++++   +
Sbjct: 1   MTNHLHSHDLPDGLDL-GPVVAIDTETMGLVPARDRLCVVQLSSGDGDAHMVQIAQGQTE 59

Query: 61  CPNLKALLTNPKVLKLFHFGRFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGLKDV 120
            PNL  +LT+PKVLKLFH+ RFD+A  E   GV TAP+YCTKIASKL RTYTDRHGLK +
Sbjct: 60  APNLTRMLTDPKVLKLFHYARFDVAALENAFGVRTAPIYCTKIASKLVRTYTDRHGLKAL 119

Query: 121 TRELLGVELSKVQQSSDWGAPSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRMALAQH 180
             E+LGV++SK QQSSDWGAP+LS  Q+ YAASDVL+LH L+  L+ ML REGR  LAQ 
Sbjct: 120 LSEVLGVDVSKAQQSSDWGAPTLSAAQLDYAASDVLYLHRLKEALDGMLAREGRTELAQA 179

Query: 181 AFDYLPHRASLDLAGWEEMDIFAH 204
            F++LP RA LDL GW E+DIF H
Sbjct: 180 CFEFLPTRARLDLGGWSEIDIFHH 203