Pairwise Alignments

Query, 205 a.a., ribonuclease D from Caulobacter crescentus NA1000 Δfur

Subject, 388 a.a., ribonuclease D (RefSeq) from Shewanella sp. ANA-3

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 7/163 (4%)

Query: 15  FADAEIIAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYDCPNLKALLTNPKVL 74
           +  + ++ +D+E +  R     L ++Q   G   A +  ++ PD       +LL NP ++
Sbjct: 39  YQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPDLSA--FWSLLDNPNII 96

Query: 75  KLFHFGRFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGL--KDVTRELLGVELSKV 132
           KL H    D+ +F  +      P++ ++IA+ L       HGL    +    LG  + K 
Sbjct: 97  KLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGM---GHGLGYAKLVETCLGEVIDKG 153

Query: 133 QQSSDWGAPSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRM 175
           +  +DW    L+  Q++YAA+DVL+L+ L  +L   L+ + R+
Sbjct: 154 ESRTDWMRRPLTEAQLSYAANDVLYLYQLYPQLADKLKAQDRL 196