Pairwise Alignments

Query, 1153 a.a., ATP-dependent nuclease subunit A from Caulobacter crescentus NA1000 Δfur

Subject, 1189 a.a., ATP-dependent nuclease/helicase from Sinorhizobium meliloti 1021

 Score =  649 bits (1673), Expect = 0.0
 Identities = 455/1188 (38%), Positives = 624/1188 (52%), Gaps = 63/1188 (5%)

Query: 5    QRIAADPTISAFVTANAGSGKTKTLIDRVARLLLAGVEPQAILCVTYTKAAAAEMQRRLF 64
            Q +A+DP  SA+V+ANAGSGKT  L  RV RLLLAG  P AILC+TYTKAAA+EM  R+F
Sbjct: 24   QALASDPACSAWVSANAGSGKTHVLTQRVIRLLLAGCRPSAILCLTYTKAAASEMSNRVF 83

Query: 65   DRLGKWSVTSDADLRAELVKLVGEADARYDAKSLSDARALFAKALETPGGLKIQTIHAFC 124
            ++L +W+   D  L   +  + G+   R     + +AR LFA+ALETPGGLKIQTIHAFC
Sbjct: 84   EKLAEWATLDDTTLEKRIEAIEGK---RPPTAKIQEARRLFARALETPGGLKIQTIHAFC 140

Query: 125  EKLLRRFPLEAGVSPGFTVMDDQAGAAIARAARRAV-AAWVDSHDDAFSEAYARFSVALD 183
            E LL +FPLEA V+  F+V+DD+A A +   ARRA+  A   + D   +EA+A      D
Sbjct: 141  EALLHQFPLEANVAGHFSVLDDRAAAVLLADARRALLTATAAASDGELAEAFATVLDLAD 200

Query: 184  FQSFEAMFAGFEARRGQIMTYVQRCGGLAGAVSDAWRRCGFDGPTSAEDL--ATRAMARL 241
                E + A   A R  I  ++    G  G  +      G +   +A  +  A   +A L
Sbjct: 201  DTGLEKLLAAIVANRAPIQAFLDHASGRGGMEAHLRAALGLEPGETAGTVMAAVWPLAGL 260

Query: 242  DLPAWRAVASVLFDGGGKQDAKSAEALAAV-ARDPDATLDLALRALFTEGGEGTPATWPA 300
            + PA      +    GG + +  A+ L AV A D  AT    L  LF  GG G P    A
Sbjct: 261  NGPALDDYIDLGLRLGGAKPSAIADGLRAVRAIDDAATRYSKLVELFFNGG-GKPKAESA 319

Query: 301  KTSGLKSREDLREALLLEQAK--LEAAREQVRAARVAEDTQNALLLAGLYIERHMAEKEA 358
              +    R   +  L +E+A+  + A  +++   ++   T+ AL+LA      + A K+A
Sbjct: 320  FLNAAMRRAAPQLELRVEEARSHMLACVDRLSIVQMYGATRAALVLAERLNRDYEALKKA 379

Query: 359  RGALDFTDLIDKTRLLLTEKVEAAWVLYKLDGGIDHILLDEAQDTAPEQWEILRALTADF 418
            R  LDF DLI +T  LL      AWV YKLD GIDHIL+DEAQDT+P QW I+++L ADF
Sbjct: 380  RSQLDFEDLIHRTAALLARSDVGAWVHYKLDQGIDHILVDEAQDTSPAQWTIIQSLAADF 439

Query: 419  FVGETSEGWSGRRAERTLFVVGDEKQSIYSFQGADPTRLLEETQGYISRIEAVGAVGKGV 478
            F GET+     R  +RT+F VGDEKQSIYSFQGA P R   E+     R+ A       +
Sbjct: 440  FAGETA-----RADDRTIFAVGDEKQSIYSFQGARPERFSRESTLTERRVRAGNKHFSPI 494

Query: 479  PLTVSYRSTHEVLSFVDALFSDPDTREGVPPPVGQDLVRHELFRHGHPGCVDLWPLTREL 538
             L +S+RST +VLS VD +F++P    G+      + + H   R G PG VDLW +    
Sbjct: 495  RLQLSFRSTVDVLSAVDTVFANPGNARGL--SARSEAIVHASNRIGQPGAVDLWDVIAPE 552

Query: 539  PGEDREAWEKPLDEEGERSANRRLAEAIAAETRAILDRGDAVFDKDLGRHRAAHAGDILV 598
            P    E W  P D   ER+    LA  IAA     + R + V +K  G  RA   GD++V
Sbjct: 553  PAASEEDWTAPFDATPERAPVNILARRIAAVLEDWIGR-ETVIEK--GVRRAMRPGDVIV 609

Query: 599  LVRRRKALFEEIIRALKRRG-VPVAGADRLALSSHIAFEDLVALGRFILFPDDDLTLAAL 657
            LVR+R A    + RALKRRG +PVAGADRL L+SHIA +DL+ALGRF+L P+DDL+LAAL
Sbjct: 610  LVRKRDAFVNALTRALKRRGNIPVAGADRLVLTSHIAVQDLIALGRFVLLPEDDLSLAAL 669

Query: 658  LKTPFCGLGDDDVYALAKGRR--GTLWVELTRR-SEERPEWAAARAVLDWALAEGRRRQP 714
            LK+P   LG++DV+ LA  R    +LW  L +  +EE   +  A   L       R   P
Sbjct: 670  LKSPLLDLGEEDVFELAARRTEGESLWRRLRQAGAEETSRYHEAVRTLSRYSGLARELLP 729

Query: 715  FEFYAGWLGLTDADGRSHRAKVLTRLGAEAEEALDEFLAQVMEAEQRGVRDLEALVADFA 774
             +FYA  LG   ADG   R   L RLG+E  + LDEFL   ++ E+ G+  L+A ++   
Sbjct: 730  HDFYARVLG---ADG--GRRAFLARLGSEVSDILDEFLTFALDHERNGLPGLQAFISTLE 784

Query: 775  ALDIIVKREMEGARREVRVMTAHGSKGLEAPIVFL----PETTVKRGAGGSPLLVTEDGA 830
                 VKRE +  R EVRVMT H +KGLEAP+VFL     E  V++    S L   E   
Sbjct: 785  IEAPTVKREQDKERDEVRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQV--SDLRFLEKAQ 842

Query: 831  L--------LWCASGKNDCAVSAKARKLREDKESQEALRLLYVALTRARERLILCGRIDA 882
            +        +W A G    ++ A   +  +    +E  RLLYV +TRA +RLI+CG    
Sbjct: 843  VDHSTLTVPVWRAPGSAPNSLIAADNERLKKLAEEEYRRLLYVGMTRAADRLIVCGYRGQ 902

Query: 883  RTKDDKVGGWYAAARAAFAHPDIAPGV-RTIGDGETAFLRYGPDPLGAPRVAPATAAVA- 940
            R   D    W++  +   A      G  R    G   +          PR  P +   + 
Sbjct: 903  RQNTDT---WHSMVQGTLAQDLKGRGTPRLFRAGSEEWQGIAWREAHVPRDLPTSEGRSE 959

Query: 941  ---APPAWI-MAQATPEPAAARYAAPSRLEDTARVPAPSPLARIAGLGRYR--------- 987
                P A +  A  TP  A  R   P     T           I G   +          
Sbjct: 960  ESQRPTAGLPTALFTPPAAPRRLPRPLAPSGTTIAIDDPDAEAIVGSALFAGKSAPKFSM 1019

Query: 988  -RGELIHKLLQLLPDLPPAQRPDAARRILA-AERDLTDTQRTEMASAAFEVLEDARFAAV 1045
             RG ++H+LLQ+LP +   +R  AA R LA +     + +R  +A    +VL+ A    +
Sbjct: 1020 LRGAILHRLLQVLPSVDGPERLAAAERYLARSVPRWPEAERRALAGTVMDVLDHADLQPL 1079

Query: 1046 FGPNSRAEVALAGTSAHLPQGLAVSGRVDRLVVDDARVLVVDYKTNRPSPDRIEDADTAY 1105
            FG +SRAEV++ GT     +  AVSGR+DRL V    V + DYKTNR  P+  E+    Y
Sbjct: 1080 FGEHSRAEVSVMGTLKLGVREFAVSGRIDRLAVTGDMVTIADYKTNREIPETPEEIAPVY 1139

Query: 1106 LAQMAVYVAVLREVFPGRTVEAALVWTDGPKLMPVPEKVMALALARLA 1153
              Q+A+Y  +L+ ++PG+     L++T+GP +  +PE ++  +L  LA
Sbjct: 1140 RNQLAIYRELLKPLYPGKRFRCVLIFTEGPAIRVLPEPMLDRSLEELA 1187