Pairwise Alignments

Query, 1153 a.a., ATP-dependent nuclease subunit A from Caulobacter crescentus NA1000 Δfur

Subject, 1113 a.a., ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing from Dechlorosoma suillum PS

 Score =  270 bits (689), Expect = 6e-76
 Identities = 329/1198 (27%), Positives = 484/1198 (40%), Gaps = 156/1198 (13%)

Query: 1    MHDPQRI---AADPTISAFVTANAGSGKTKTLIDRVARLLLAGVEPQAILCVTYTKAAAA 57
            M DP+++   A DP  S  V A AGSGKT  L  R+ RLLL G  P  IL +T+T+ AA 
Sbjct: 1    MTDPRQLVLDALDPRRSVVVEACAGSGKTWLLASRIVRLLLEGAAPGDILAITFTRKAAR 60

Query: 58   EMQRRLFDRLGKWSVTSDADLRAELVKLVGEADARYDAKSLSDARALFAKALETPGGLKI 117
            E++ R+   L   +   DA    E    + E     DA  L  AR L+ +  +    L +
Sbjct: 61   EIEERVMGWLRDLAAMPDA----EATVFLAERGMTADAGLLRRARGLYERVADAQPPLSV 116

Query: 118  QTIHAFCEKLLRRFPLEAGVSPGFTVMDDQAGAAIARAARRAVAAWVDSHDDAFSEAYAR 177
             T H +  +L+   PL +G++    V  +  G  +    +   A      +   +  +  
Sbjct: 117  HTFHGWFLQLIAAAPLVSGLAGSSLV--ESTGRLLEELWQNFAAELQADPEGELAGHFTA 174

Query: 178  FSVALDFQSFEAMFAGFEARRGQIMTYVQRCGGLAGAVSDAWRRCGFDGPTSAEDLATRA 237
                    S  ++      RR + + Y    GG    V+ A  +            A   
Sbjct: 175  LLQGAGLDSTRSLLMRLVGRRAEWLAYT---GGTENGVAHALEQLQ---ALLGVGEAGEG 228

Query: 238  MARLDLPAWRAVASVLFDGGGKQDAKSAEALAAVAR---DPDATLDLALRALFTEGGEGT 294
            +     P W A          + + K+ +AL A  R    P A  + A  AL +     T
Sbjct: 229  LKAFFAPGWEADYHAYLGFLEQSETKTDQALVAPLRAALQPGAAPEAAFAALGSVLLTQT 288

Query: 295  PATWPAKTSGLKSRE----------DLREALLLEQAKLEAAREQVRAARVAEDTQNALLL 344
                  K SG   +           DL + L      L A RE +RA ++ E  ++ L L
Sbjct: 289  GTLRSRKPSGALDKRFGSDGAARFLDLHQRL---GQSLLATREVLRAEQILEFNRHGLSL 345

Query: 345  AGLYIERHMAEKEARGALDFTDLIDKTRLLLTEKVEAAWVLYKLDGGIDHILLDEAQDTA 404
               ++ER    K+AR  +DF D   +   LL ++  AA++  +LD    HILLDE QDT 
Sbjct: 346  GAAFLERLEKHKQARRLIDFVDAEWQVLQLLQDEGHAAFLQARLDARYKHILLDEFQDTN 405

Query: 405  PEQWEILRALTADFFVGETSEGWSGRRAERTLFVVGDEKQSIYSFQGADPTRLLEETQGY 464
            P QW+IL A    +  G+  E          LF+VGD KQSIY F+ A+P RL      +
Sbjct: 406  PLQWQILLAWLDAYTHGDGGEA-------PCLFLVGDPKQSIYRFRQAEP-RLFATAADF 457

Query: 465  ISRIEAVGAVGKGVPLTVSYRSTHEVLSFVDALFSDPDTREGVPPPVGQDLVRHELFRHG 524
            +      GA  + +    + R+   V+  V+ALFS      G  P   Q  +  +L    
Sbjct: 458  LE--HNFGA--RRLAQDATRRNARSVVEVVNALFSVEPAFTGFRP---QSSLAGQL---- 506

Query: 525  HPGCVDLWPLTRELPGEDRE---AWEKPLDEEGERSANRRLAEAIAAETRAILDRGDAVF 581
             PG V+L PL      E++    A   PL      + + R  E  AA   A L +  A  
Sbjct: 507  -PGRVELLPLVSLAEEEEQSAGAALRDPLTTPATEATDPRRDEE-AARLAARLQQFMATL 564

Query: 582  DKDLGR-HRAAHAGDILVLVRRRKALFEEIIRALKRRGVPVAGADRLALSSHIAFEDLVA 640
                G   R A  GD+++LVR+R  L     RALK  G+P   A R  L   +   D+ A
Sbjct: 565  RVKEGEGERPARWGDVMLLVRKRTQL-AAYERALKAAGIPYLAASRGGLLQTLEARDIAA 623

Query: 641  LGRFILFPDDDLTLAALLKTPFCGLGDDDVYALAKGRRGTLW---VELTRRSEERPEWAA 697
            L  F++ P  DL LA +L+TP   +GDDD+  LA    G  W   + L  R E RP  A 
Sbjct: 624  LFEFLVLPSADLALAQVLRTPLFAVGDDDLLQLAAAGPGPWWERLMGLCNRGEARPRLAR 683

Query: 698  ARAVLDWALAEGRRRQPFEFYAGWLGLTDA-------DGRSHRAKVLTR--------LGA 742
            A A+LD                GWL   D        D   H+ ++L R        L  
Sbjct: 684  AFALLD----------------GWLKAADVLPAHDLLDRVFHQGELLARYREAVPAALWP 727

Query: 743  EAEEALDEFLAQVMEAE-------QRGVRDLEAL---VADFAALDIIVKREMEGARREVR 792
              E  L   L   ++ +        R + +L  L    AD A  + IV+ +    +  VR
Sbjct: 728  GVEANLLALLQLALDLDGGRYPSLPRFIDELSRLRDADADEAPDEGIVEGDSNDGQGRVR 787

Query: 793  VMTAHGSKGLEAPIVFLPETTVKRGAGGSPLLVTEDGALLWCASGKNDCAVS-------- 844
            ++T H +KGLEAPIV+L +   + G       +  D    W         +S        
Sbjct: 788  ILTIHAAKGLEAPIVWLLDANAEGGGPADAWSLLVD----WPPQAPRPEHLSLYGIKADR 843

Query: 845  AKARKLREDKES----QEALRLLYVALTRARERLILCGRIDARTKDDKVGGWYAAARAAF 900
              AR+   + E+    +E L LLYVA+TRA++  +  G    +    +   +   ARA  
Sbjct: 844  GAAREPLFEGEAKLAEREELNLLYVAITRAKQVFVASGSAPKKGDSPENSPYQRLARALV 903

Query: 901  AHPDIAPGVRTIGDGETAFLRYGPDPLGAPRVAPATAAVAAPPAWIMAQ-ATPEPAAARY 959
            A    A    T+  G+ A      D +   + A + +    P  W  A     EP   R 
Sbjct: 904  AQGATADEAGTLAYGDLAL-----DAMAGSQ-AGSQSLPGLPEQWRPAPFLAVEPVGERR 957

Query: 960  AAPSRLEDTARVPAPSPLARIAGLGRYRRGELIHKLLQLLPDLPPAQRPDAARRILAAER 1019
              P   ED                     G L+H  L+ L     A  PD  R++  A  
Sbjct: 958  LGPG--EDAL------------------FGILLHGCLERL-TAGLALEPDWWRKVGGA-- 994

Query: 1020 DLTDTQRTEMASAAFEVLEDARFAAVFGPNSRAEVALAGTSAHLPQGLAVSGRVDRLVVD 1079
              ++    E  +AA  ++     A +  P+      +A   A +        RVDRLV  
Sbjct: 995  TASEAGGEEAEAAARRLMARPELAFLLDPS-----LVARNEAEISNAEGQVKRVDRLVET 1049

Query: 1080 DARVLVVDYKTNRPSPDRIEDADTAYLAQMAVYVAVLREVFPGRTVEAALVWTDGPKL 1137
               V VVDYK++R    R+ +    Y  Q+A Y  +L  ++  + V AALV+ DG  L
Sbjct: 1050 PEAVWVVDYKSSRADTKRLAE----YRRQVAEYRELLTPLYGQKPVRAALVFGDGTLL 1103