Pairwise Alignments

Query, 1153 a.a., ATP-dependent nuclease subunit A from Caulobacter crescentus NA1000 Δfur

Subject, 1125 a.a., Double-strand break repair helicase AddA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  592 bits (1527), Expect = e-173
 Identities = 431/1162 (37%), Positives = 591/1162 (50%), Gaps = 68/1162 (5%)

Query: 5    QRIAADPTISAFVTANAGSGKTKTLIDRVARLLLAGVEPQAILCVTYTKAAAAEMQRRLF 64
            Q  AADPT S +++ANAGSGKTK L DRVARLLL  V P+ ILC+TYTKAAA+EMQ RLF
Sbjct: 13   QIAAADPTSSVWLSANAGSGKTKVLTDRVARLLLEDVPPERILCLTYTKAAASEMQNRLF 72

Query: 65   DRLGKWSVTSDADLRAELVKLVGEADARYDAKSLSDARALFAKALETPGGLKIQTIHAFC 124
              LG WS+  D DLR  L +L G       A     AR LFA+A+ETPGGLKIQTIH+FC
Sbjct: 73   RTLGGWSMLDDGDLRRRLAEL-GLLQVEITAARCRSARTLFARAIETPGGLKIQTIHSFC 131

Query: 125  EKLLRRFPLEAGVSPGFTVMDDQAGAAIARAARRAVAAWVDSHDDAFSEAYARFSVALDF 184
              LLRRFP+EAGVSP FT MD +A A + RA  R +A      D  F+ A +     L  
Sbjct: 132  ASLLRRFPMEAGVSPQFTEMDSRAEAELQRAVLRQMAEG-PGRDSLFALAQSVDETNLPE 190

Query: 185  QSFEAMFAGFEARRGQIMTYVQRCGGLAGAVSDAWRRCGFDGPTSAEDLATRAMARLDLP 244
               E +              +++  GLA            D  T+  D   +A  R DL 
Sbjct: 191  LMKELLSHREALTSPPAQGVIEKTLGLAPG----------DSITALSDRTFQAKDR-DLI 239

Query: 245  AWRAVASVLFDGGGKQDAKSAEALAAVA-RDPDATLDLALRALFTEGGEGTPATWPAKTS 303
               A A      G   DAK+A  L  +A R PD T    L  L   G       +  KT 
Sbjct: 240  GRVAKACAT---GSSTDAKAAAKLQELADRAPDTTWFEVLEGLLLYGATAKAGPFAPKTD 296

Query: 304  GLKSREDLREALLLEQAKLE-------AAREQVRAARVAEDTQNALLLAGLYIERHMAEK 356
               ++   R AL  +   L         AR+   A  +A  T+     A ++++ + A K
Sbjct: 297  AFPTKA-TRTALGADMGALNDLMCRVAEARQPRLALEIAAQTRIVHNFANVFLKAYQAGK 355

Query: 357  EARGALDFTDLIDKTRLLLTEKVEAAWVLYKLDGGIDHILLDEAQDTAPEQWEILRALTA 416
            +ARG LDF DLI + + LLT+   A WVL++LDGGIDH+L+DEAQDT+P QW+++R LT 
Sbjct: 356  DARGWLDFDDLILRAKTLLTDPGVAQWVLFRLDGGIDHMLVDEAQDTSPVQWDVIRLLTR 415

Query: 417  DFFVGETSEGWSGRRAERTLFVVGDEKQSIYSFQGADPTRLLEETQGYISRIEAVGAVGK 476
            +F  G+ +         RT+FVVGD+KQSIYSFQGADP       Q + + +  VG   +
Sbjct: 416  EFTAGQGAR----TNVLRTIFVVGDQKQSIYSFQGADPAGFDRMRQHFGTELAQVGTPLQ 471

Query: 477  GVPLTVSYRSTHEVLSFVDALFSDPDTREGVPPPVGQDLVRHELFRHGHPGCVDLWPLTR 536
               L  S+RS+  VL  VD  FS     +G+    G +   H  F    PG VDLWP   
Sbjct: 472  ERLLLFSFRSSRAVLRHVDETFS-RFQHQGLGG--GSE---HIAFHEALPGRVDLWPALA 525

Query: 537  ELPGEDREAWEKPLDEEGERSANRRLAEAIAAETRAILDRGDAVFDKDLGRHRAAHAGDI 596
            +   +  + W  P+D+         LA  IAAE R +L+ G  +     G  R    GD 
Sbjct: 526  KAEKQTPQNWTDPVDKIAADDPRHVLARKIAAEIRRLLESGTQITSAK-GETRPITPGDF 584

Query: 597  LVLVRRRKALFEEIIRALKRRGVPVAGADRLALSSHIAFEDLVALGRFILFPDDDLTLAA 656
            LVLV++R  +F E+IRA K   +P+AG+DRL + + +A +DL+AL  F   P+D + LA 
Sbjct: 585  LVLVQKRSEIFHELIRACKTERLPIAGSDRLRVGAELAVQDLMALLAFAATPEDSMALAC 644

Query: 657  LLKTPFCGLGDDDVYALAKGRRGT-LWVELTRRSEERPEWAAARAVLDWALAEGRRRQPF 715
            +L++P CG    +++ LA+  R   LW  L R S+   E    RA L     +    +P+
Sbjct: 645  VLRSPLCGWTQRELHVLAQPNRNRFLWAAL-RDSDAHGE---TRAFLQDVRDQADFLRPY 700

Query: 716  EFYAGWLGLTDADGRSHRAKVLTRLGAEAEEALDEFLAQVMEAEQRGVRDLEALVADFAA 775
            +       LT   GR    +++ RLG EAEE +D  L Q ++ EQ  +  L   VA F  
Sbjct: 701  DLLE--RVLTRHGGRE---RLIARLGEEAEEGIDVLLDQALQYEQTEIPSLSGFVAWFRQ 755

Query: 776  LDIIVKREMEGARREVRVMTAHGSKGLEAPIVFLPETTVKRGAG-GSPLLVTEDGALLWC 834
             D+ +KR+++  R E+RVMT HG+KGLEAPIV +P+          S LL  EDG L+W 
Sbjct: 756  DDMSIKRQIDARRDEIRVMTVHGAKGLEAPIVIMPDCAKPSNTNTRSKLLPLEDGPLVWA 815

Query: 835  ASGKNDCAVSAKARKLREDKESQEALRLLYVALTRARERLILCGRIDARTKDDKVGGWYA 894
             + +    V     +    ++++E +RLLYVA+TRA   LI+    +  T  D    W+A
Sbjct: 816  GNKETRPEVIKPRAEEIALRDTEERMRLLYVAMTRAESWLIVAAAGETGTGTD---SWHA 872

Query: 895  AARAAFAHPDIAPGVRTIGDGETAFLRYGPDPLGAPRVAPATAAVAAPPAWIMAQATPEP 954
                        P       G    L +G  P  AP   P   A  +P     A   P P
Sbjct: 873  MVTEGIEAQ--TPHEVEFPTGTGLRLEHGVWPPDAPSPMPLHTA-HSPQQPAFAPMPPMP 929

Query: 955  AAARYAAPSRLEDTARVPAPSPLARIAGLGR---YRRGELIHKLLQLLPDLPPAQRPDAA 1011
                  APS L     +        I GL +    RRG+ IH LL+ LPD PP      A
Sbjct: 930  ERRNTRAPSDLGGAKVIE-----NAIEGLDKDAAQRRGKQIHLLLEHLPDHPPESWASLA 984

Query: 1012 RRILAAERDLTDTQRTEMASAAFEVLEDARFAAVFGPNSRAEVALAGTSAHLP--QGLAV 1069
             R+L AE D  +T   ++ + A  VLE+     +F P++ AEV+L   +A LP   G  +
Sbjct: 985  PRLLGAE-DNPETV-ADLLAEARGVLENPALEPLFAPDTLAEVSL---TAPLPGLNGAQI 1039

Query: 1070 SGRVDRLVVDDARVLVVDYKTNRPSPDRIEDADTAYLAQMAVYVAVLREVFPGRTVEAAL 1129
             G VDRL++   R++ VD+K+N+  P   ED     L QM  Y   L  ++P  ++E A+
Sbjct: 1040 LGTVDRLIIGPERIVAVDFKSNQAVPAHPEDTPEGLLRQMGAYAEALAAIYPDMSIETAI 1099

Query: 1130 VWTDGPKLMPVPEKVMALALAR 1151
            +WT    LMP+P  ++  AL R
Sbjct: 1100 LWTRTATLMPLPHGLVIAALQR 1121