Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase recQ from Caulobacter crescentus NA1000 Δfur

Subject, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

 Score =  417 bits (1071), Expect = e-121
 Identities = 248/613 (40%), Positives = 352/613 (57%), Gaps = 18/613 (2%)

Query: 5   PESPELDRARDVLRRTFGHADFRGLQAGVIHELLTGHSAMAVLPTGGGKSLCYQIPSLIR 64
           P+  + D     L+  FG+  FR  Q  VI ++  G  A+ ++PTGGGKSLCYQ+P+L+ 
Sbjct: 8   PDVTDSDPLAACLQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVL 67

Query: 65  PGLGLVISPLIALMADQVQGLRQAGVAAERLDSNISMDERSDIWRRIDAGEVDLLYLSPE 124
            GL LV+SPLI+LM DQV  L+Q GVAA  L+S+ S +E   I+R++  GE+ LLY+SPE
Sbjct: 68  HGLTLVVSPLISLMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPE 127

Query: 125 GLMQPWMLDRLSRTPLALIAVDEAHCVSQWGHDFRPEYRMLGRLAELFPDAPRLAVTATA 184
            L+    ++RL   PL+L A+DEAHC+SQWGHDFRPEY  LG+L +LFP  P +A+TATA
Sbjct: 128 RLLTDSFIERLHNLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATA 187

Query: 185 DARTRDDIRAELRLQGAAEFVDSFARPELALSAERKRGKGHDRVVELVLERPGRSGVIYA 244
           D  TR+DI   L +    E + SF RP +  +   K     +++ + +  + G SG+IY 
Sbjct: 188 DKATREDICQRLGI-APFELLTSFDRPNIRYTVAEKLNAA-NQLRQFIQAQNGNSGIIYC 245

Query: 245 GSRDGTEKLAERLNAEGVPALAYHAGLDKAVRARRLEDFLEADAAVMVATIAFGMGVDKP 304
            SR   +++AERL  +G  A AYHAG  +  RA   E FL+    ++VAT+AFGMG++K 
Sbjct: 246 SSRRRVDEVAERLRMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKS 305

Query: 305 DVRYVIHADPPAAIEAYWQEVGRAGRDGQPAEGITLYGSADMAWAARRIETREAPDEVKQ 364
           +VR+V+H D P ++EAY+QE GRAGRDG  AE   L+  AD+      IE +E P   +Q
Sbjct: 306 NVRFVVHYDIPKSVEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQE-PGPQQQ 364

Query: 365 VQSRKLRQFYAMLEGVTCRAAAVRRYFGEEGVGHCGVCDICVSPPTGIDATQAAQKALSA 424
           V+  KL    A  E  TCR   +  YF E     CG CDIC+ PP   D  + AQK LS 
Sbjct: 365 VEYHKLNTMAAFAEAQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSC 424

Query: 425 VHRLGGRLGRGRVIEHLMG-KTKDVTPQ-EAQLPTFGIGREFSQPTWRDLFDTLIFEGLL 482
           + RL  + G   +IE L G K   V  +   +L T+GIG+E S   W  +   +I  G  
Sbjct: 425 IFRLQQKFGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFA 484

Query: 483 REDPNDGRPLIGLGDVEGVRQVYRNERKVALRQTTDAPDSGGRAGGGMRKRREGRALTIP 542
            +D   G   I L      R V + E  + L +   +  +       +++R   RA   P
Sbjct: 485 SQDITRG-SAIKLN--PQARAVLKGELPLQLAEPRISITT------HVKRRSSSRA---P 532

Query: 543 AE-NQLLFEALRSWRKEQAQLQHVPPYVIFHDATLAEIAAARPATLAALGKAGGVGQGKL 601
              ++ LF  L+  R+  A+   VPPY++F+DATLAE+AA  P +   +    GVG+ KL
Sbjct: 533 INYDRKLFARLKQLRRSLAEELDVPPYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKL 592

Query: 602 DRYGEAVLKVVRE 614
           +R+G   L  + +
Sbjct: 593 NRFGGEFLDEIND 605