Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 405 a.a., transglycosylase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  204 bits (519), Expect = 4e-57
 Identities = 132/401 (32%), Positives = 201/401 (50%), Gaps = 13/401 (3%)

Query: 27  AISPAPPPAPTPQTTVTPAPTPQTPVPAGELAFDTWMQDFRGRAIAAGLSPDLLDRELGG 86
           AI+ AP  A  P     PA         G+L   ++++  +  A+A G+  D+ DR L G
Sbjct: 16  AIAGAPALAQAPAQPGNPAAAC-----GGDLG--SFLEGVKAEAVAKGIPADVADRALAG 68

Query: 87  VIPDPRVISLDSRQPEFSKPVGDYIRGVISEDRVAIGRSK-RDQLDFLSQIESRYGVPGD 145
              D +V+S D  Q  F +   ++ +  +S+ R+ IG  K R+  D  ++ E  +GVP  
Sbjct: 69  AAIDQKVLSRDRAQGVFKQTFTEFSKRTVSKSRLDIGAQKMREYADVFARAEQEFGVPAP 128

Query: 146 ILLAVWAMESAFGQLQGNFDVVRSMVSLAADGRRRAWAEGELIAALKIIDSGEVTRAQLK 205
           ++ A WAME+ FG +QG+F+   ++V+LA D RR      +L+AA++++  G++  A   
Sbjct: 129 VITAFWAMETDFGAVQGDFNTRDALVTLAHDCRRPEMFRPQLLAAIEMVQHGDLDPAATT 188

Query: 206 GSWAGAMGQTQFIPTSFRATAVDFDGDGRRDIWGSDADALASAANLLVRGGWKRNVGWAR 265
           G+WAG +GQ Q +P    A  VD DGDG  ++  S  DA+ +AA  +   G+K    W +
Sbjct: 189 GAWAGEIGQVQMLPEDIIAYGVDGDGDGHVNLKKSSPDAILTAAKFIQSLGFKPGEPWIQ 248

Query: 266 EVILPPGFDYSVTE-GPREIPAWWEARGVRRADGLPWTAQDAASPAMLILPAGATGPAFL 324
           EV +P    +  T   P      W A GV   DG      ++   A L+LP G  G AFL
Sbjct: 249 EVRVPEQLPWEKTGLQPGMTAGDWFALGVAPRDG---NTSNSGLEASLVLPQGRKGAAFL 305

Query: 325 ALPNHFAIRTYNNSTSYALGIGLLADRFAGGAPPITPWPVETPLSMSDRMAAQIALARVG 384
             PN      +N S  Y       A R A GAPP      E  L  ++  A Q  L  +G
Sbjct: 306 TYPNFKIYLEWNQSFIYTTSAAYFATRLA-GAPPYQQGNPEPGLGDAEMKALQTRLQALG 364

Query: 385 FNPGPADGVIGAGTRRALRAWQQSQQLPADGYLSNDMVARL 425
            + G  DG++G+GTR AL+  Q    +PADG+ +  ++  L
Sbjct: 365 HDVGKIDGILGSGTRAALQKEQLKLGIPADGWATPGLLEAL 405