Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 329 a.a., lytic murein transglycosylase B (RefSeq) from Shewanella amazonensis SB2B

 Score =  112 bits (281), Expect = 1e-29
 Identities = 97/300 (32%), Positives = 145/300 (48%), Gaps = 13/300 (4%)

Query: 52  VPAGELAFDTWMQDFRGRAIAAGLSPDLLDRELGGVIPDPRVISLDSRQPEFSKPVGDYI 111
           V A E   DT    F  R  A G S   +D  L G   +P+VI   SR P  +KP   Y 
Sbjct: 19  VLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPKVIEAISR-PWEAKPWHLYR 77

Query: 112 RGVISEDRVAIGRSK-RDQLDFLSQIESRYGVPGDILLAVWAMESAFGQLQGNFDVVRSM 170
              ++E R+  G    R     + +  +++GV  ++++A+  +E+ +GQ  GN+ V  ++
Sbjct: 78  PRFLTETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGIETHYGQTMGNYSVRDAL 137

Query: 171 VSLAADGRRRA-WAEGELIAALKIIDSGEVTRAQLKGSWAGAMGQTQFIPTSFRATAVDF 229
            +L      RA +   EL    K+    ++  + LKGS+AGA+G  QF+P+S+R   VDF
Sbjct: 138 YTLGFYYPPRASFFLKELGELQKLEQEEKLDVSALKGSYAGAIGFGQFMPSSYRYYGVDF 197

Query: 230 DGDGRRDIWGSDADALASAANLLVRGGWKRN--VGWAREVILPPGFDYSVTEGPREIPAW 287
           DGDGR+D+ GS ADA+ S AN   + GW+    V +  E         S+ +G    P  
Sbjct: 198 DGDGRKDLLGSPADAIGSVANYFHQHGWQTGDPVAFRLESYGETPPTASLWQGE---PLT 254

Query: 288 WEARGVRRADGLPWTAQ---DAASPAMLI-LPAGATGPAFLALPNHFAIRTYNNSTSYAL 343
            +A  +  ADG     +   D A PAML  L        ++   N F I  YN S  YA+
Sbjct: 255 LKASDI-LADGFGLADKRDLDVARPAMLFKLEQETHNEYWMGFKNFFVITRYNRSPLYAM 313