Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 395 a.a., lytic murein transglycosylase (RefSeq) from Shewanella loihica PV-4

 Score =  253 bits (647), Expect = 6e-72
 Identities = 147/369 (39%), Positives = 209/369 (56%), Gaps = 4/369 (1%)

Query: 59  FDTWMQDFRGRAIAAGLSPDLLDRELGGVIPDPRVISLDSRQPEFSKPVGDYIRGVISED 118
           FDT +   + +A+AAG+S   ++  LG V    RVI LD +QPEFS+   +Y    +++ 
Sbjct: 26  FDTCVSALKQKALAAGVSSKTVEEGLGQVKYVARVIELDKKQPEFSQTFDNYFSKRVTDW 85

Query: 119 RVAIGRSKRDQL-DFLSQIESRYGVPGDILLAVWAMESAFGQLQGNFDVVRSMVSLAADG 177
           RV  GR    Q    L +++  YG+P   L+A W +E+ FG  +G   V+ S+ +LA D 
Sbjct: 86  RVQEGRRLLKQHGQLLHKLQQEYGIPPQYLVAFWGLETNFGSYKGKMPVIDSLTTLACDP 145

Query: 178 RRRAWAEGELIAALKIIDSGEVTRAQLKGSWAGAMGQTQFIPTSFRATAVDFDGDGRRDI 237
           RR  +  GELI ALK+ ++ +   AQ++GSWAGAMG TQF+P+++   AVD DGDG+ D+
Sbjct: 146 RRSDYFTGELIQALKLKEAYQFDNAQMQGSWAGAMGHTQFMPSAYAKYAVDADGDGKADL 205

Query: 238 WGSDADALASAANLLVRGGWKRNVGWAREVILPPGFDY-SVTEGPREIPAWWEARGVRRA 296
           + S  DAL+SAAN L   GW RN  W REV LP  +DY  +    ++    W   G+ +A
Sbjct: 206 FNSTQDALSSAANFLNNLGWMRNERWGREVSLPKDYDYRHLGRNDKQSLTTWAGLGITQA 265

Query: 297 DGLPWTAQDAASPAMLILPAGATGPAFLALPNHFAIRTYNNSTSYALGIGLLADRFAGGA 356
           +G   +  D    A L LPAG TGPAFL   N   I  +N S  YA+ +G LADR  GGA
Sbjct: 266 NGRALSTPD--MQAALYLPAGHTGPAFLGYGNFDVIMRWNRSEFYAIAVGHLADRINGGA 323

Query: 357 PPITPWPVETPLSMSDRMAAQIALARVGFNPGPADGVIGAGTRRALRAWQQSQQLPADGY 416
                 P    +S +     Q  L   G+  G  DGV+G  +R  L+A+Q+S  L ADG+
Sbjct: 324 RLHVAPPKHDNISRAKLKQLQAKLNEKGYEVGKPDGVLGVNSRAGLQAFQRSVGLVADGF 383

Query: 417 LSNDMVARL 425
            S++  + L
Sbjct: 384 PSDETFSAL 392