Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 370 a.a., lytic murein transglycosylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  257 bits (656), Expect = 5e-73
 Identities = 165/419 (39%), Positives = 219/419 (52%), Gaps = 67/419 (15%)

Query: 11  LLLAGCADTSPQGPLTAISPAPPPAPTPQTTVTPAPTPQTPVPAGELAFDTWMQDFRGRA 70
           L LAGC              A  PA  P   + P P            +  W+  +R RA
Sbjct: 16  LALAGCGG------------ARVPAAGPADDLRPVPNA---------GYADWVARYRARA 54

Query: 71  IAAGLSPDLLDRELGGVIPDPRVISLDSRQPEFSKPVGDYIRGVISEDRVAIGRSKRDQL 130
            AA  S DLL R   G    P V++ D  Q EF + + DY+   +S++RVA GR+   Q 
Sbjct: 55  -AADFSDDLLRRAFAGTGYLPGVVARDRNQVEFRRTLEDYLAIAVSDERVARGRAAVAQY 113

Query: 131 -DFLSQIESRYGVPGDILLAVWAMESAFGQLQGNFDVVRSMVSLAADGRRRAWAEGELIA 189
              L+ IE RYGVP +++ A+W +ES +G  +G+  VV +  +LA DGRR A+ EG+L A
Sbjct: 114 RPTLAAIEDRYGVPPELVTAIWGLESFYGDRKGDIPVVSATSTLAYDGRRGAFFEGQLTA 173

Query: 190 ALKIIDSGEVTRAQLKGSWAGAMGQTQFIPTSFRATAVDFDGDGRRDIWGSD-ADALASA 248
           AL+I+ +G++   +L GSWAGAMG TQFIPTSF A AVDF GDGRRDIW  D  DALASA
Sbjct: 174 ALRILRAGDIPADRLVGSWAGAMGHTQFIPTSFEAFAVDFTGDGRRDIWSDDPTDALASA 233

Query: 249 ANLLVRGGWKRNVGWAREVILPPGFDYSVTEGPREIPAWWEARGVRRADGLPWTAQDAAS 308
           A  L R GW R                                      GL W A+D   
Sbjct: 234 AAYLDRNGWTR--------------------------------------GLRWGAEDPEG 255

Query: 309 PAMLILPAGATGPAFLALPNHFAIRTYNNSTSYALGIGLLADRFAGGAPPITPWPVE-TP 367
                L     GP F    N   I+ YNNS +YA+G+G L++R AGG P  TP+P +   
Sbjct: 256 S----LQPQPGGPRFATTSNFNVIKRYNNSDAYAIGVGHLSERIAGGGPLRTPFPPDANG 311

Query: 368 LSMSDRMAAQIALARVGFNPGPADGVIGAGTRRALRAWQQSQQLPADGYLSNDMVARLK 426
           L+ +DR+  Q  L R GF+ G ADGV+G  T  A+RA+Q+++ LP  G  S +MV  ++
Sbjct: 312 LTKADRVTLQEGLTRAGFDTGGADGVVGPNTEAAIRAYQRARGLPVTGVPSMEMVRAVR 370