Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 415 a.a., lytic murein transglycosylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  286 bits (732), Expect = 8e-82
 Identities = 171/407 (42%), Positives = 228/407 (56%), Gaps = 11/407 (2%)

Query: 25  LTAISPAPPPAPTPQTTVTPAPTPQT-PVPAGELAFDTWMQDFRGRAIAAGLSPDLLDRE 83
           L   + A P A +P  T  P    Q   +PA    F+ W+  F  RA AAG+ P      
Sbjct: 15  LPVAAMATPLAQSPHPTARPGAVVQAVALPA---RFEAWIGAFERRARAAGIRPATFRAA 71

Query: 84  LGGVIPDPRVISLDSRQPEFSKPVGDYIRGVISEDRVAIGRSK-RDQLDFLSQIESRYGV 142
             GV   P VI  D  Q EF+K + +Y+   +S+ R+  GR+    + D L  IE RYGV
Sbjct: 72  FAGVDYLPDVIRRDRSQAEFTKQIWEYLDSAVSDARLRNGRAAFAARRDTLRAIERRYGV 131

Query: 143 PGDILLAVWAMESAFGQLQGNFDVVRSMVSLAADGRRRAWAEGELIAALKIIDSGEVTRA 202
             +++ A+W +ESA+G  +G    + +M +LA +GRR A+ E +LIAALKI+  G+ T  
Sbjct: 132 EAEVVTAIWGLESAYGSYRGATPTLSAMATLAYEGRRAAFFEDQLIAALKILQDGDTTPG 191

Query: 203 QLKGSWAGAMGQTQFIPTSFRATAVDFDGDGRRDIWGSD-ADALASAANLLVRGGWKRNV 261
           ++ GSWAGAMG TQF+PTS+   AVDF GDGRRDIWG D  DALAS A  L   GW R  
Sbjct: 192 RMTGSWAGAMGHTQFMPTSYLDYAVDFTGDGRRDIWGEDPTDALASTAAYLEAFGWTRGQ 251

Query: 262 GWAREVILPPGFDYSVT-EGPREIPAWWEARGVRRADGLPWTAQDAASPAMLILPAGATG 320
            W  EV LP GFDYS+T E  +  PA W   GV   DG    A      A ++LPAGA G
Sbjct: 252 PWGVEVRLPAGFDYSLTGEKVKRSPADWARLGVLDMDG---RAVPNHGRASILLPAGARG 308

Query: 321 PAFLALPNHFAIRTYNNSTSYALGIGLLADRFAGGAPPITPWP-VETPLSMSDRMAAQIA 379
            AF+   N   I  YN + +Y + +G+L+DR AGG      WP  +  LS +++   Q  
Sbjct: 309 AAFMIFDNFHVIERYNTADAYVIAVGVLSDRIAGGQGIRADWPRGDRALSFTEKKEMQRL 368

Query: 380 LARVGFNPGPADGVIGAGTRRALRAWQQSQQLPADGYLSNDMVARLK 426
           L R GF+ G  DG+IG  T  A+R +Q S  +  DGY S D++ RL+
Sbjct: 369 LGRAGFDTGKVDGIIGPNTIDAVRRYQASIGVVPDGYASLDILRRLR 415