Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 430 a.a., lytic murein transglycosylase (RefSeq) from Shewanella sp. ANA-3

 Score =  245 bits (626), Expect = 2e-69
 Identities = 153/426 (35%), Positives = 225/426 (52%), Gaps = 16/426 (3%)

Query: 8   FLVLLLAGCADTSPQGPLTAISPAPPPAPTPQTTV--TPAPTPQTP----VPAGELAFDT 61
           +L   +A C        L+A S AP  +   QT +  T A   + P    + A   AF T
Sbjct: 9   YLAASIAACVS------LSACSSAPTSSGNSQTAIAETQAAVQEMPLSDTIAAHAAAFPT 62

Query: 62  WMQDFRGRAIAAGLSPDLLDRELGGVIPDPRVISLDSRQPEFSKPVGDYIRGVISEDRVA 121
            + + + RA   GLS   +   +  +   P+VI LD  QPEFS+   +Y     ++ RV 
Sbjct: 63  CVANLQERARTEGLSEATIQDTVASLQFVPKVIELDQAQPEFSQTFNNYFTKRATDWRVN 122

Query: 122 IGRSK-RDQLDFLSQIESRYGVPGDILLAVWAMESAFGQLQGNFDVVRSMVSLAADGRRR 180
            GR   +     L ++   YGVP   +L+ W +E+ +G  +G   V+ S+ +LA + RR 
Sbjct: 123 EGRRLLKKHRALLDKLAQEYGVPPQYILSFWGLETNYGSYKGKMSVLDSLATLACEPRRS 182

Query: 181 AWAEGELIAALKIIDSGEVTRAQLKGSWAGAMGQTQFIPTSFRATAVDFDGDGRRDIWGS 240
            +   EL+ ALK+ +     ++ + GSWAGAMG TQF+P+++   A+D DGDG+ D+W S
Sbjct: 183 GYFTTELMQALKLKEKYGFDKSTMVGSWAGAMGHTQFMPSAYAKYAIDGDGDGKADLWNS 242

Query: 241 DADALASAANLLVRGGWKRNVGWAREVILPPGFDYSVTEGPREIP-AWWEARGVRRADGL 299
             DAL SAAN L   GW+RN  W REVILP  F+Y      +  P + W A+ V +++GL
Sbjct: 243 TEDALTSAANFLQHLGWQRNERWGREVILPRNFNYENLGAKQAQPLSQWAAQSVVQSNGL 302

Query: 300 PWTAQDAASPAMLILPAGATGPAFLALPNHFAIRTYNNSTSYALGIGLLADRFAGGAPPI 359
           P  A +    A L LP+G TGPAFL   N   I  +N S  YA+ +G LADR  GG P  
Sbjct: 303 PLPAIN--MKAALYLPSGHTGPAFLGYENFNVIMRWNRSEFYAITVGHLADRINGGEPLK 360

Query: 360 TPWPVETPLSMSDRMAAQIALARVGFNPGPADGVIGAGTRRALRAWQQSQQLPADGYLSN 419
              P +  LS       Q  L   GF+ G  DGV+G  +   ++A+Q+S+ + ADG+ S 
Sbjct: 361 VAPPEQPRLSREQIKQLQTKLNESGFDVGKPDGVLGRNSSAGIQAFQRSKNMIADGFPSP 420

Query: 420 DMVARL 425
           ++ + L
Sbjct: 421 EVFSAL 426