Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 354 a.a., lytic murein transglycosylase B (RefSeq) from Shewanella sp. ANA-3

 Score =  105 bits (262), Expect = 2e-27
 Identities = 100/351 (28%), Positives = 156/351 (44%), Gaps = 27/351 (7%)

Query: 6   RVFLVLLLAGCADTSPQGPLTAISPAPPPAPTPQTTVTPAPTPQTPVPAGELAFDTWMQD 65
           R  L  L   C  +   G  TA  PA P         T APTP  P        +    +
Sbjct: 5   RACLAPLAVLCLSSYLLGCSTANEPAAPTPQPSAAVTTQAPTPVLP--------EALKAE 56

Query: 66  FRGRAIAAGLSPDLLDRELGGVIPDPRVISLDSRQPEFSKPVGDYIRGVISEDRVAIGRS 125
           F    +A G +   ++  L     +  VI   SR P  +KP   Y    ++E R+  G +
Sbjct: 57  FIKTQMAQGFTQAEVESFLAKANYNQAVIDAISR-PWEAKPWHQYYPIFLTEKRLNAGLA 115

Query: 126 --KRDQLDFLSQIESRYGVPGDILLAVWAMESAFGQLQGNFDVVRSMVSLAADGRRRA-W 182
             K+ +   +++  ++Y V   I++A+  +E+ +GQ  GN+ V+ ++ +L      RA +
Sbjct: 116 FWKKHEAT-IAKAATKYQVEPQIIVAIIGIETFYGQYTGNYPVIDALYTLGFYYEPRATF 174

Query: 183 AEGELIAALKIIDSGEVTRAQLKGSWAGAMGQTQFIPTSFRATAVDFDGDGRRDIWGSDA 242
              E    +K++    +    LKGS+AGAMG  QFIP+S+R  AVDFDG G RD+  S  
Sbjct: 175 FRKEFGELMKLVKEEHLDINSLKGSYAGAMGFGQFIPSSYRHYAVDFDGSGNRDLLQSPE 234

Query: 243 DALASAANLLVRGGWKRNVGWAREVILPPGFDYSVTEGPREIPAWWEARGVRRADGLPWT 302
           DA+ S AN     GW+ +   A  ++       S    P+      E    + +D L  +
Sbjct: 235 DAIGSVANYFHEHGWQLHAPVALPLV------NSSANAPKAKVWAGEKLQYKVSDILSPS 288

Query: 303 AQ-------DAASPAMLI-LPAGATGPAFLALPNHFAIRTYNNSTSYALGI 345
                    DA+  AMLI L    +   +L L N + I  YN S  Y++ +
Sbjct: 289 LSLATARDLDASQKAMLIELEQVGSKDYWLGLNNFYVITRYNRSPLYSMAV 339