Pairwise Alignments

Query, 550 a.a., M28-family zinc peptidase from Caulobacter crescentus NA1000 Δfur

Subject, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  383 bits (983), Expect = e-110
 Identities = 222/532 (41%), Positives = 304/532 (57%), Gaps = 31/532 (5%)

Query: 25  IDPAKLTAHIKTLSSDAFEGRGPATAGETKTVAYISEQMKAVGLEPGGDLKDGKRLWTQD 84
           ++ A+    IK LSSD FEGR P T GE  T+ Y+S+    +GL+        +  + Q 
Sbjct: 1   MNEARFRNDIKNLSSDEFEGRAPTTQGEKLTLDYLSKAFTEMGLKGAY-----QGSFLQP 55

Query: 85  VPLSKFDIDGPVTAHIMVGADHIMLS----QGEQVAIRAAMTHVNAVSIKDAPIVFAGYG 140
           VP+  +  D          A  + L+    +  Q  + ++      V+I++AP+VF GYG
Sbjct: 56  VPMVSYTADE---------AQQVTLAGLPFKYRQDLVLSSRHDNGGVNIENAPLVFVGYG 106

Query: 141 VKAPERNWDDFKGMDVKGKVVVVLINDPDF-ETGSGDFGGKAMTYYGRWTYKFEEAARLG 199
           V APE  W+D++ +D+KGK+ V+L+NDP F    SG F GKAMTYYGRW+YKFEEA+R G
Sbjct: 107 VNAPEYAWNDYQDLDMKGKIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQG 166

Query: 200 AAGLLIVHETAPASYGWATVKNSNTNTMFDIV-RKDPTKQHPPMEGWIQRDVAVDLFKKA 258
           A G L++H+T PASY W+ V+NS T    D+V  K        +EGW+  D A  LF+KA
Sbjct: 167 ALGALLIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQDSRVQVEGWLTLDTATKLFEKA 226

Query: 259 GLDFEALK-KAAQSRDFKPVELKGATFSADYKVKHETIVSKNVVGKVTGAKRPDETVIFS 317
           GL    L  +AA S    P+E    T +  +K K E   S NVV  + G+++ DE ++F+
Sbjct: 227 GLSLPTLMARAADSPINLPLE---QTANIAFKNKAEYANSYNVVATLAGSQQADEHILFT 283

Query: 318 GHWDHLGVGLPDAK-GDKIYNGAVDNATGIAAMLEMGRL----AASGPKPDRSMVFLAVT 372
           GHWDH  +G  D+K GDKIYNGA+DNA+GIA +LE+ R     A  G    RS+ F+A T
Sbjct: 284 GHWDH--IGKDDSKEGDKIYNGAMDNASGIAGILEIARQLADNATQGHGLARSVTFIATT 341

Query: 373 AEERGLLGSEYYASNPLYPLAKTAGVINTDALDPTGPAKDFTISGNAKLDLLDDLIAKGK 432
            EE+GLLGS YYA+NP+YP+ KT  V+N D+ +  G  KDFTI G  K +L + LI   K
Sbjct: 342 GEEQGLLGSRYYAANPIYPIDKTVAVLNLDSTNIYGKTKDFTIVGKGKSELENYLIDAAK 401

Query: 433 AVGRTYTPDPATEAGYFYRSDHFPFAKRGVPAISFGSGEDLVEGGVAAGKAASDAYRINA 492
              R    +    +G F+RSDHF FAK GVPA+  G G + ++   A  K    A     
Sbjct: 402 QQNRIALGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSEPIDAATADYKTQMQATMKGC 461

Query: 493 YHQPADEWNDSWRLDGMSADIALVYSVGRDLAGSNRWPEWGEGAEFKAARDA 544
           YH   DE+ + W L G   D+ + Y V R+L  S  WP +  G EF   R A
Sbjct: 462 YHNVCDEYREDWDLSGAIQDLEVYYQVTRELGNSQDWPGYYPGTEFNNLRPA 513