Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000 Δfur

Subject, 646 a.a., excinuclease ABC subunit UvrB from Methanococcus maripaludis S2

 Score =  660 bits (1703), Expect = 0.0
 Identities = 346/662 (52%), Positives = 461/662 (69%), Gaps = 27/662 (4%)

Query: 47  FKLVSDYQPAGDQPTAIAELVEGLQNGDQD--QVLLGVTGSGKTFTMAQVIARTQRPALI 104
           FKL ++++P G Q  AIA LV+ L+   +   Q LLGVTGSGKTFT+A VI + Q+P L+
Sbjct: 6   FKLKAEFKPKGSQLEAIAGLVKDLEKNPEKSKQTLLGVTGSGKTFTIANVIEKVQKPTLV 65

Query: 105 LAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRM 164
           +A NKTLAAQLY+E K FFPEN VEYFVSYYDYYQPE+Y+P+ D YIEKD+ IN +I++M
Sbjct: 66  IAHNKTLAAQLYNEFKEFFPENRVEYFVSYYDYYQPESYIPQKDQYIEKDAQINPKIEQM 125

Query: 165 RHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYK 224
           R  AT AIL R DVI+VASVSCIYG+G+ E +  M F L+VG+++    +I  LV  QY+
Sbjct: 126 RLRATSAILSRRDVIIVASVSCIYGLGNPELFKEMGFELKVGEKIKRSDIIEKLVDIQYE 185

Query: 225 RNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIK 284
           RND     G FR +GDT++I P  Y+D   RV MFGDE++ + E D     K  +++   
Sbjct: 186 RNDMELVPGRFRVKGDTLDIIPG-YQDDILRVEMFGDEIDRIYELDPKNMSKKHEIDSFY 244

Query: 285 VYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGS 344
           +Y   H V P    + AI +I   LKE  EWL  N  +L++ RL+Q+T +D+EMIE TGS
Sbjct: 245 MYPAKHFVIPEEDKKNAINSI---LKELDEWL-PNLDMLKSHRLKQKTLYDIEMIEETGS 300

Query: 345 CAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLA 404
           C GIENYSR+   RK GEP     +Y P++ L+  DESHQT+PQI  MYKGDR+RK +L 
Sbjct: 301 CKGIENYSRHFENRKEGEPAYCLLDYFPEDFLIVIDESHQTIPQIRGMYKGDRSRKQSLI 360

Query: 405 EYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPP 464
           +YGFRLPSA DNRPLKFEE+       + VSATP  +EL+ +  V  EQ+IRPTGL+DP 
Sbjct: 361 DYGFRLPSAYDNRPLKFEEFKKYMNNVIFVSATPGEYELDNSNQV-VEQIIRPTGLLDPE 419

Query: 465 VEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHS 524
           VE+RP+     +QV+D++ E  + ++KG R L+T LTK++AE+LTEYL ++ ++ RY+HS
Sbjct: 420 VEIRPIE----NQVEDIIKETEKMVEKGERVLITTLTKRLAEELTEYLAKRNVKARYLHS 475

Query: 525 DVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQT 584
           D+DTIER EIIR+LRLG FD LVGINLLREGLDIPE G V ILDADKEGFLR++ SLIQT
Sbjct: 476 DIDTIERTEIIRNLRLGKFDCLVGINLLREGLDIPEVGFVGILDADKEGFLRNDKSLIQT 535

Query: 585 IGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILN 644
           IGRAARN + KV+LYA ++T S+++A++ET RRR+ Q  +N +H ITP+++   +K I  
Sbjct: 536 IGRAARNANSKVVLYAGKMTDSIKKAVSETERRRKLQKEHNEKHNITPQTI---VKPIRE 592

Query: 645 SPYERGDRVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDEIKR 704
              +  D   +P+             +    + +LEA+M EAA  LEFE A ++RD I +
Sbjct: 593 KVVDISDVKHIPVA------------DIPNVIVELEAEMYEAAEALEFEKAIKIRDTIAK 640

Query: 705 MK 706
           +K
Sbjct: 641 LK 642