Pairwise Alignments

Query, 1028 a.a., TonB-dependent outer membrane receptor from Caulobacter crescentus NA1000 Δfur

Subject, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  194 bits (492), Expect = 3e-53
 Identities = 242/910 (26%), Positives = 369/910 (40%), Gaps = 133/910 (14%)

Query: 167  VVGSHI-RGAKDSASPVIILDRESLSRAGRTSVADALSALPQAFGGLGAEDASSTGADPT 225
            V GS I R   +SA PV +L  E +++ G + V+  L+ +P    G    DA S+     
Sbjct: 44   VTGSRIQRTDMESALPVTVLSAEDIAKTGLSDVSAVLAQMPFNTAGSFISDAGSSA---- 99

Query: 226  GTNSNKATGVNLRGLGTDATLVLVNGRRLAGTG-LRGDFADVSSIPMAAVERIEVLLDGA 284
               SN A+   +RGLG++ TL L+NGRR+A +    GD  +++ IPM A+ERIE+L DGA
Sbjct: 100  ---SNHASS-GMRGLGSNRTLTLINGRRIAPSATFGGDATNLNLIPMDAIERIEILRDGA 155

Query: 285  SALYGSDAVGGVVNIVLRERFEGVETRAMVGATTQGGASQWSFGQTVGKAWNGGNLVISY 344
            SA+YGSDA+GGV+NI+L++ F+G+   A  G  TQGG  + S   T G   +  + ++  
Sbjct: 156  SAIYGSDAIGGVINIILKKTFDGLAFDAKFGNPTQGGRDEKSASVTFGNTSDKSSSLVII 215

Query: 345  EHSARDRLRGRDRDYT--------GQADLRVLGGTDR----RRFYGMPGTILRANPSGVL 392
            EH   D L G  R +         G++ L    GT R    R   G  GT      +G+ 
Sbjct: 216  EHKQFDPLEGGQRPHLTANWDEKYGRSALYAPEGTYRPVASRPIKGADGTFSDPVYTGLQ 275

Query: 393  APAFAIPTGQSGVGLTPESFQAGTINLENQLGAYDVLPRQRRDSVYVALTQEVSSAVSLS 452
             P    P  +        + +AG+    N     D LP Q +DSV+  +T  ++  +   
Sbjct: 276  VPGKDCPADRI------VTSKAGSACGFNHFDGTDYLPDQTKDSVFSNMTYRITDELEWF 329

Query: 453  ADLRATR-RRFTNRSVASSPTLTVNRNNPYFVSP---TGQASERIAYSFLNELGGQRVNG 508
                  R +  T+ +   +P L +  +NP  ++P   T  ASE  AY  L  +  +    
Sbjct: 330  GQAIVMRDKSITSSTALWTPNLYIAADNP--LNPTFGTANASEVQAYHRLKGVADRTTEF 387

Query: 509  LAETLGLSFGGQARLPGAWRLDAYGAYGLEQGRSRTDNLVNTSYLSEALGTTANNAATAF 568
             +  + +  G    L  A  L  Y  Y  +     TD+ V    L EA+           
Sbjct: 388  DSNVVDVVTGLNLEL-DAGSLSWYVQYSDQIVNIETDSYVFEDKLQEAV----------- 435

Query: 569  NTATDGFFNPFIGQGSNPSAILD-FIRGGYLTRKTRGETASVNLKLDG-ELFTLPAGAVG 626
                 G +NPF+  G+   A LD F+     TRK    T    L        +LP G +G
Sbjct: 436  ---DKGLYNPFVEGGNATQATLDTFLHTA--TRKATSNTTGTGLSWAALAPISLPGGDLG 490

Query: 627  LAIGGQVRREALKTSGVSLTSGFSPTPVARRDV--QRRIGAVFAELRAPIFGGDFVRPGL 684
             A+G + ++   K +  +  +  +       D    R   A F EL  P+         L
Sbjct: 491  YAVGMEYQKIEYKDTRDAQQAAGNVLGTYGGDSAGDRSYKAAFVELELPV---------L 541

Query: 685  QRLELSAAVRREDYG--DIASTDPKVGLIWSPASGLTLKASYGASFRAPALIE-LNEP-- 739
              L +  A R + Y   D+      V + +     L L+ASYG  FRAP+L + L EP  
Sbjct: 542  DHLNVKLASRYDQYSLPDVGQLSNSVNVRYEALDNLVLRASYGQGFRAPSLDDLLGEPAT 601

Query: 740  --QIYAPTTLTRN-----------GKDTIVMILYGGNQDLRPETATSKTLTVALAPARWP 786
                   TTL ++            +DT  +    GN++L PE +   +       A W 
Sbjct: 602  SYDYVTDTTLCQSLPADQQKGNPACEDTQYLRKSSGNKELEPEKSAQYSF-----GAVW- 655

Query: 787  RFKASVTGFDTRFSDRIGQPGLDHLSKVLTAPEFAPFVSLVSPGSNAADLARIQAL-IDD 845
                ++T       D       D +S +                    DL  I  L   D
Sbjct: 656  ----NITENIDFVVDYYNIEITDQVSYI--------------DAQTIVDLEAIGGLGAYD 697

Query: 846  PRSLAQGIFPAQSYAAIIDGRWVNTGQLRVRG-----LDVSARYTARIGD-DPLTFSADL 899
            P      I+  +     ID   +  G + + G     LDVS      + D     F+ + 
Sbjct: 698  PNY----IYVKRKADGTIDE--IGAGNINMDGVQTSGLDVSFTSNFDLADLGTFKFAVEG 751

Query: 900  TWLADYQRKITPQAKAVQQAGVAGQPADLRLRAAASWTHGDLTTTAALNHVGDL------ 953
            T+  +Y  + +P AK     G  G P  LR     S+   D +T+    ++         
Sbjct: 752  TYALEYTEQASPIAKRYDVLGTKGYP-PLRFNTTFSYAIDDFSTSLIAKYIDSYDGETPQ 810

Query: 954  RTEIGGR---IRPWTTADLNLAYGFKAGPMAGLTLALNVQNLLDDDPSFYDSPLAVGYDP 1010
            + E+G        +TT DL   Y F +       + +  +NL D  P+   S    GYD 
Sbjct: 811  QQEVGTNKQDFSSFTTWDLTFNYDFNSYG----NVTVGARNLFDAMPAVNYSLGYPGYDT 866

Query: 1011 ANADPLGRSV 1020
               + LGR V
Sbjct: 867  DTHNILGRVV 876