Pairwise Alignments

Query, 1028 a.a., TonB-dependent outer membrane receptor from Caulobacter crescentus NA1000 Δfur

Subject, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (416), Expect = 2e-44
 Identities = 179/687 (26%), Positives = 294/687 (42%), Gaps = 115/687 (16%)

Query: 167 VVGSHI-RGAKDSASPVIILDRESLSRAGRTSVADALSALPQAFGGLGAEDASSTGADPT 225
           V GS I R   ++ASPV ++D  ++   G TSV D +  +  +  G      ++ GAD  
Sbjct: 43  VTGSRIQRQDMETASPVTVIDAAAIKAEGFTSV-DQMLQVQTSMAGAAVGSTTNNGADGV 101

Query: 226 GTNSNKATGVNLRGLGTDATLVLVNGRRLAGTGLRGDFA-DVSSIPMAAVERIEVLLDGA 284
                    V+LRG+G+  TLVL+NGRR+  +G   D A D++SIP+A + R+E+L DGA
Sbjct: 102 AQ-------VDLRGMGSQRTLVLLNGRRMVNSGSGADSAVDLNSIPVAMIARVEILKDGA 154

Query: 285 SALYGSDAVGGVVNIVLRERFEGVETRAMVGATTQGGASQWSFGQTVGKAWNGGNLVISY 344
           SA+YGSDA+ GVVNI+ ++ FEG +       T +G           G   +GGN     
Sbjct: 155 SAVYGSDAIAGVVNIITKKDFEGFQFDMNGSGTDKGDGQSGDVSALYGFNTDGGNYTFGA 214

Query: 345 EHSARDRLRGRDRDYTGQADLRVLGGTDRRRFYGMPGTILRANPSGVLAPAFAIPTGQSG 404
            +S R  +   DRD+    D                      N S +      IPTG   
Sbjct: 215 AYSDRRGVIQGDRDWYDPLD----------------------NTSSI------IPTGTLN 246

Query: 405 VGLTPE--SFQAGTINLENQLGAYDVLPRQRRDSVYVALTQEVSSAVSLSADLRATRRRF 462
             +     ++   T   +     Y   P +RR S++  +TQE+ + V L+AD   T RR 
Sbjct: 247 QKVIDANGNWVKRTETYDYSNDVYFQTPSERR-SLFANMTQELGNDVVLTADAIYTNRRS 305

Query: 463 TNRSVASSPTLTVN-RNNPYFVSPT----------------GQASERIAYS-FLNELGGQ 504
             +  A    + +N   +P    PT                  A  ++ Y+  +N++G +
Sbjct: 306 NQQLAAQPAQIKLNVCGDPRVQDPTAGCLTLDQGMIDAGIKADARGQVQYNRRMNDVGPR 365

Query: 505 RVNGLAETLGLSFGGQARLP----GAWRLDAYGAYGLEQGRSRTDNLVNTSYLSEALGTT 560
             N   +T  LS G    L       W +D    +G  + ++  DN +N + ++ ++   
Sbjct: 366 IYNQDTDTWRLSAGLAGSLDVHTGMNWNVDY--TFGKNEAKTGVDNSINATLMANSI--- 420

Query: 561 ANNAATAFNTATDGFFNPFIGQGSNPSAILDFIRGGYLTRKTRG-ETASVNLKLDGELFT 619
                         + +P+     +P    D     Y  + T G E  +++  L+GELF 
Sbjct: 421 --------------YADPYAWFEGSPLTD-DMKDVSYQQQSTGGNEQQTLSAGLNGELFD 465

Query: 620 LPAGAVGLAIGGQVRREA-------LKTSGVSLTSGFSPTPVARRDVQRRIGAVFAELRA 672
           L AGAVG AIG + RRE+       +  +G S  +   PT          + ++F E+  
Sbjct: 466 LSAGAVGFAIGAEYRRESGFYNPDPVVVAGDSTAAQQDPT-----SGNYNVISIFEEVSV 520

Query: 673 PIFGGDFVRPGLQRLELSAAVRREDYGDIA-STDPKVGLIWSPASGLTLKASYGASFRAP 731
           P           ++L    A+R +DY     +T  K+GL ++    L ++      FRAP
Sbjct: 521 PF---------TEKLTGEFALRLDDYSTFGKATTWKIGLTYTATDELMVRTVAATGFRAP 571

Query: 732 ALIEL---NEPQIYAPTT--LTRNGKDTIVMILYGGNQDLRPETATSKTLTVALAPARWP 786
           ++ EL   N       T   L  + +   +++    + DL+PE + S T  +  +P+   
Sbjct: 572 SVAELYGGNSGSFDYLTNPWLPASEQTGQILVNRTSDPDLKPEESESYTAGLVYSPSYID 631

Query: 787 RFKASVTGFDTRFSDRIG----QPGLD 809
               ++  +  + +D I     Q GLD
Sbjct: 632 GMSITLDYWRFKVTDAIARADVQVGLD 658